RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tmem116A0A0G2JGD3 401 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Smim13E9Q942 88 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Spink6Q8BT20 105 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ighv14-3A0A075B5R9 117 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Shisal2aA2A9G7 189 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 KprpB2RUR4 657 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm20481G3UXK4 153 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ins1P01325 108 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 YrdcQ3U5F4 280 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ttc28Q80XJ3 2450 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ankrd11E9Q4F7 2643 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 P04944 107 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Tmem95P0DJF3 176 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Cd24P24807 76 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Rasl11aQ6IMB1 242 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Muc15Q8C6Z1 331 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Trpt1Q8K3A2 249 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Mrpl20Q9CQL4 149 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Chchd5Q9CQP3 110 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Mrpl53Q9D1H8 118 aaKnown RBP9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Cend1Q9JKC6 149 aa9.08□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Trdv1A0A075B657 112 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm16442D3YZG3 307 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gata4Q08369 441 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Mrpl16Q99N93 251 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 PerpQ9JK95 193 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 AcanQ61282 2132 aaKnown RBP9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ighv8-8A0A0A6YXQ0 119 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 NpsP0C0P8 89 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 P0C913 63 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Cd5P13379 494 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Fam216bQ8CC14 138 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Olfr981Q8VEU2 310 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Rchy1Q9CR50 261 aa9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Dido1Q8C9B9 2256 aaKnown RBP9.07□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ighv1-55A0A075B5W6 117 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ighv1-81A0A075B5Y4 117 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Trav16nA0A075B634 117 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Trav14n-2A0A0G2JDF5 121 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 CrxO54751 299 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 CntfrO88507 372 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ccsmst1Q6RUT7 136 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Dkk2Q9QYZ8 259 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ighv14-2A0A075B5R7 117 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm45521A0A1B0GRK0 198 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Thy1P01831 162 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Sub1P11031 127 aaKnown RBP9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 S100a8P27005 89 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Snx22Q8C084 192 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Tex48Q9DA81 110 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Josd1Q9DBJ6 202 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Dnajb12Q9QYI4 376 aaKnown RBP9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Trav7n-5A0A075B604 112 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 TbpP29037 316 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Bsph2Q0Q236 131 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Slc35d2Q762D5 326 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Olfr904Q7TRC9 310 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Rasl10aQ8K5A4 203 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 PpdpfQ9CR37 115 aa9.06□□□□□ -0.96
Col9a1-202ENSMUST00000088349 TroQ6DIC6 2087 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 BC030500E9Q6W0 185 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Olfr235E9Q9Z6 312 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ssbp4Q3U4B1 363 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Foxc2Q61850 494 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 PdpnQ62011 172 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Vmn1r62Q8R2C0 300 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Olfr975Q8VG91 310 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Srd5a2Q99N99 254 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Mcrip2Q9CQB2 160 aaKnown RBP9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Mrpl33Q9CQP0 65 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Prr23a3Q9CWP9 254 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Cby1Q9D1C2 127 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Vmn1r63Q9EPT1 300 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Nbeal1E9PYP2 2688 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Q3UNZ8 350 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Rbfox3Q8BIF2 374 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Tomm6Q9CQN3 74 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Pygo1Q9D0P5 417 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Tmem219Q9D123 240 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Q9D131 166 aa9.05□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Trav7-5A0A0G2JFX6 112 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Cox8bP48772 70 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Atp5iQ06185 71 aaKnown RBP9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Fam24aQ8CF27 98 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Vmn1r197Q8R265 298 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Hectd1Q69ZR2 2618 aaKnown RBP9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ighv5-6A0A075B5Q0 117 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm6040Q4QY32 63 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ly6g5bQ8K1T4 194 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 UrahQ9CRB3 118 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ttc32Q9DAC7 148 aa9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Usp9xP70398 2559 aaKnown RBP9.04□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Ovol3D3YYM0 189 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm10192Q3V0S1 108 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 F930015N05RikQ8C3A3 210 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm5105Q8C6Y9 112 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 D630044L22RikQ8C701 164 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 QrfpQ8CE23 124 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Olfr365Q8VFT2 312 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Cysrt1Q9D1E4 142 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms