RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Rbfox3Q8BIF2 374 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Snx22Q8C084 192 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ighv1-55A0A075B5W6 117 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tmem29A2ANF5 204 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Prima1Q810F0 153 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm10190Q8BSD7 107 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm10118Q8C8J5 116 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Dkk4Q8VEJ3 221 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Arl3Q9WUL7 182 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Trdv1A0A075B657 112 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gosr1O88630 250 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Stpg2Q8C8J0 561 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 QrfpQ8CE23 124 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Olfr1367Q8VFG2 316 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Sdk1Q3UH53 2193 aa7.7□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 IgipA0A1B0GR74 53 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm21060J3KMU4 56 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 P01723 117 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 TcraP01849 138 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 TbpP29037 316 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Htr1dQ61224 374 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ttc9cQ810A3 171 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Muc15Q8C6Z1 331 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Dido1Q8C9B9 2256 aaKnown RBP7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm20379A0A087WR34 119 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm28778A0A087WSK7 233 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm16442D3YZG3 307 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Svs5P30933 122 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Dlx6P70397 175 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defb33Q30KN3 62 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gtf2h5Q8K2X8 71 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defa3P28310 93 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defa10P50708 93 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defa15P50713 93 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 RhogP84096 191 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Cphx2Q8BX39 182 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm5468Q8C3D3 155 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tspo2Q9CRZ8 162 aa7.69□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Prr3Q811B5 190 aaKnown RBP7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Iba57Q8CAK1 358 aaKnown RBP7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Mrpl53Q9D1H8 118 aaKnown RBP7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Them7Q9DCP4 223 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Klf13Q9JJZ6 289 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Esp3J3QN49 87 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 P0C1Z5 52 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 TgfaP48030 159 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gng4P50153 75 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 NpyP57774 97 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tmem88bQ3TYP4 173 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Try10Q792Z1 246 aaKnown RBP7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Slc16a4Q8R0M8 500 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Mrpl20Q9CQL4 149 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 8030423J24RikQ9CX45 142 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Stpg1Q9D2F5 341 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 PerpQ9JK95 193 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tomm40Q9QYA2 361 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ovol1Q9WTJ2 267 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Trav6d-7A0A075B6B0 112 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Trav14d-1A0A075B6B1 121 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 eef1akmt3D3YWP0 232 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ang4Q3TMQ6 144 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Vmn1r216Q8R257 298 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Mcrip2Q9CQB2 160 aaKnown RBP7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Prr23a3Q9CWP9 254 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 HilpdaQ9JLS0 64 aa7.68□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ighv1-16A0A075B5U1 98 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ly6lH3BJG9 140 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defa37K9J724 93 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 P01724 129 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 P01727 129 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defa5P28312 93 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Plp1P60202 277 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tmem136Q3TYE7 245 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm10192Q3V0S1 108 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm28044L7N1X0 119 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm10775Q3V290 127 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Spcs1Q9D958 161 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Zfp119aQ9JIC0 545 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 SpenQ62504 3644 aaKnown RBP7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Vps13cQ8BX70 3748 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Hectd1Q69ZR2 2618 aaKnown RBP7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 P04943 107 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Defa24Q5G865 93 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Akap9Q70FJ1 3797 aa7.67□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Ighv8-8A0A0A6YXQ0 119 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm12845A0A0N4SUM5 588 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 CrygcQ61597 174 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tmem97Q8VD00 176 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Rabac1Q9Z0S9 185 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm17359A0A0G2JEB7 487 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tmem170bP86050 132 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Zmat4Q8BZ94 229 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 F930015N05RikQ8C3A3 210 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Klk10Q99M20 278 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Fmc1Q9CR13 113 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 CklfQ9DAS1 152 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Igkv4-90A0A075B5L3 117 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Trav8-1A0A075B641 109 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tmem141A2AJB2 108 aa7.66□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Rps20P60867 119 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms