RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Klk9Q32M27 251 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Fhl4Q8CDC8 279 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ormdl1Q921I0 153 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tmem223Q9CQE2 199 aaKnown RBP6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Dnmt1P13864 1620 aaKnown RBP6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 P18529 117 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Arhgef28P97433 1693 aa6.86□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Spink4O35679 86 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Tcl1b3P56842 122 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Lypd6Q8BPP5 171 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Mrps16Q9CPX7 135 aaKnown RBP6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Nwd1A6H603 1563 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 SelenowP63300 88 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Foxf1Q61080 378 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Lyz2P08905 148 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 P01675 107 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Defb28Q3V2L0 89 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ddx60E9PZQ1 1711 aa6.85□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Bglap2P86547 95 aa6.84□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ighv8-12A0A0G2JDE1 119 aa6.84□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Gm10638F6QEG2 257 aa6.84□□□□□ -1.31
Clcn3-202ENSMUST00000056508 A6H6Q4 206 aa6.84□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Klf9O35739 244 aa6.84□□□□□ -1.31
Clcn3-202ENSMUST00000056508 Ighv8-13A0A075B5Y0 101 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 MsmbO08540 113 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 P03980 138 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Trav4n-4A0A075B615 110 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Csrp2P97314 193 aaKnown RBP6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Mapk1ip1Q9D7G9 263 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Mrc1Q61830 1456 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 IgflQ6B9Z0 140 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Srsf12Q8C8K3 266 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Trav6d-5A0A075B6B9 112 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 P01672 111 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Zfp36P22893 319 aaKnown RBP6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Rpl28P41105 137 aaKnown RBP6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Igfbp6P47880 238 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Defb14Q7TNV9 67 aa6.83□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Gm7075D3Z497 112 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Cmc2Q8K199 79 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Rnase6Q9D244 153 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Slc48a1Q9D8M3 146 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Abca16E9PWJ7 1678 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Trav6-6A0A075B603 114 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Trbv29A0A0G2LB96 114 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Gfra4Q9JJT2 260 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Chd2E9PZM4 1827 aaKnown RBP6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Myh6Q02566 1938 aaKnown RBP6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Itgbl1Q8VDV0 494 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Sp7Q8VI67 428 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 NmbQ9CR53 121 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ptpn23Q6PB44 1692 aa6.82□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Gm4792Q569Q2 183 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Myh11O08638 1972 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv1-56A0A0A6YXG2 117 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Sfta2E9PXB6 77 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 P01636 108 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ly6dP35459 127 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Mrpl33Q9CQP0 65 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ehbp1l1Q99MS7 1716 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Myh7Q91Z83 1935 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ly6lH3BJG9 140 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Sslp1Q3UN54 99 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Wfdc10Q3V2J9 124 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Il25Q8VHH8 169 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 HilpdaQ9JLS0 64 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv1-69A0A0G2JFS5 117 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ear10Q923L6 156 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Trav1A0A075B5Z4 110 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ear2P97425 156 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 2210407C18RikQ6YI28 220 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 OtosQ8R448 89 aa6.81□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Mroh2aD3Z750 1679 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Igkv12-38A0A0G2JEI7 115 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 P18528 98 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Zfp36l1P23950 338 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 9130230L23RikQ8CC80 163 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Reg4Q9D8G5 157 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv1-50A0A075B5W1 117 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Sh2d1bO35324 132 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Znf672Q99LH4 468 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv2-7A0A075B5Q8 116 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Adamts12Q811B3 1600 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 BC024063A0A1W2P7G7 749 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 P18525 117 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Wt1P22561 449 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Bglap3P54615 95 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Lyg1Q9D7Q0 197 aa6.8□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Dip2bQ3UH60 1574 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Prex1Q69ZK0 1650 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 A930003A15RikQ3U552 87 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Smim37Q8BT35 56 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Q8K1L6 76 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Spink11Q09TK7 88 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Cfap126Q6P8X9 189 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Gm4763Q8CFJ5 196 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Scrt1Q99M85 348 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 SmpxQ9DC77 85 aa6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ahdc1Q6PAL7 1594 aaKnown RBP6.79□□□□□ -1.32
Clcn3-202ENSMUST00000056508 Ighv5-6A0A075B5Q0 117 aa6.79□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms