Protein–RNA interactions for Protein: A0A0G2JEI7

Igkv12-38, Immunoglobulin kappa chain variable 12-38 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv12-38A0A0G2JEI7 Gm25239-201ENSMUST00000174915 86 ntBASIC34.22■■■■□ 3.07
Igkv12-38A0A0G2JEI7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Igkv12-38A0A0G2JEI7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Igkv12-38A0A0G2JEI7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Igkv12-38A0A0G2JEI7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Igkv12-38A0A0G2JEI7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Igkv12-38A0A0G2JEI7 Gm15042-201ENSMUST00000120212 883 ntBASIC30.3■■■□□ 2.44
Igkv12-38A0A0G2JEI7 Gm15045-201ENSMUST00000117359 883 ntBASIC29.74■■■□□ 2.35
Igkv12-38A0A0G2JEI7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Igkv12-38A0A0G2JEI7 Gm24109-201ENSMUST00000175489 103 ntBASIC29.49■■■□□ 2.31
Igkv12-38A0A0G2JEI7 Psd-208ENSMUST00000224556 2034 ntBASIC29.43■■■□□ 2.3
Igkv12-38A0A0G2JEI7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Igkv12-38A0A0G2JEI7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.03■■■□□ 2.24
Igkv12-38A0A0G2JEI7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Igkv12-38A0A0G2JEI7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Igkv12-38A0A0G2JEI7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Igkv12-38A0A0G2JEI7 Gm23366-201ENSMUST00000175022 89 ntBASIC28.6■■■□□ 2.17
Igkv12-38A0A0G2JEI7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Igkv12-38A0A0G2JEI7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Igkv12-38A0A0G2JEI7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Igkv12-38A0A0G2JEI7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Igkv12-38A0A0G2JEI7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Igkv12-38A0A0G2JEI7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Igkv12-38A0A0G2JEI7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Igkv12-38A0A0G2JEI7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Igkv12-38A0A0G2JEI7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Igkv12-38A0A0G2JEI7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.29■■■□□ 2.12
Igkv12-38A0A0G2JEI7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Igkv12-38A0A0G2JEI7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Igkv12-38A0A0G2JEI7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Igkv12-38A0A0G2JEI7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Igkv12-38A0A0G2JEI7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.92■■■□□ 2.06
Igkv12-38A0A0G2JEI7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Igkv12-38A0A0G2JEI7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Igkv12-38A0A0G2JEI7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Igkv12-38A0A0G2JEI7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.8■■■□□ 2.04
Igkv12-38A0A0G2JEI7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Igkv12-38A0A0G2JEI7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Igkv12-38A0A0G2JEI7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Igkv12-38A0A0G2JEI7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Igkv12-38A0A0G2JEI7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.39■■□□□ 1.98
Igkv12-38A0A0G2JEI7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Igkv12-38A0A0G2JEI7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.26■■□□□ 1.95
Igkv12-38A0A0G2JEI7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.19■■□□□ 1.94
Igkv12-38A0A0G2JEI7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Igkv12-38A0A0G2JEI7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Igkv12-38A0A0G2JEI7 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.06■■□□□ 1.92
Igkv12-38A0A0G2JEI7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Igkv12-38A0A0G2JEI7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Igkv12-38A0A0G2JEI7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Igkv12-38A0A0G2JEI7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Igkv12-38A0A0G2JEI7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Igkv12-38A0A0G2JEI7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
Igkv12-38A0A0G2JEI7 Gm25238-201ENSMUST00000174914 89 ntBASIC26.88■■□□□ 1.89
Igkv12-38A0A0G2JEI7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Igkv12-38A0A0G2JEI7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Igkv12-38A0A0G2JEI7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.76■■□□□ 1.87
Igkv12-38A0A0G2JEI7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Igkv12-38A0A0G2JEI7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Igkv12-38A0A0G2JEI7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Igkv12-38A0A0G2JEI7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Igkv12-38A0A0G2JEI7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Igkv12-38A0A0G2JEI7 Gm27325-201ENSMUST00000175467 74 ntBASIC26.64■■□□□ 1.86
Igkv12-38A0A0G2JEI7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Igkv12-38A0A0G2JEI7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Igkv12-38A0A0G2JEI7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.57■■□□□ 1.84
Igkv12-38A0A0G2JEI7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.54■■□□□ 1.84
Igkv12-38A0A0G2JEI7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Igkv12-38A0A0G2JEI7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Igkv12-38A0A0G2JEI7 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.5■■□□□ 1.83
Igkv12-38A0A0G2JEI7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Igkv12-38A0A0G2JEI7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.49■■□□□ 1.83
Igkv12-38A0A0G2JEI7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
Igkv12-38A0A0G2JEI7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Igkv12-38A0A0G2JEI7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Igkv12-38A0A0G2JEI7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Igkv12-38A0A0G2JEI7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Igkv12-38A0A0G2JEI7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.22■■□□□ 1.79
Igkv12-38A0A0G2JEI7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Igkv12-38A0A0G2JEI7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.1■■□□□ 1.77
Igkv12-38A0A0G2JEI7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.09■■□□□ 1.77
Igkv12-38A0A0G2JEI7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Igkv12-38A0A0G2JEI7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.05■■□□□ 1.76
Igkv12-38A0A0G2JEI7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Igkv12-38A0A0G2JEI7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Igkv12-38A0A0G2JEI7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Igkv12-38A0A0G2JEI7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Igkv12-38A0A0G2JEI7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Igkv12-38A0A0G2JEI7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Igkv12-38A0A0G2JEI7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Igkv12-38A0A0G2JEI7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Rab21-202ENSMUST00000218831 843 ntBASIC25.87■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Igkv12-38A0A0G2JEI7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Igkv12-38A0A0G2JEI7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Igkv12-38A0A0G2JEI7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms