RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Olfr317Q5NCD6 327 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Tmem88bQ3TYP4 173 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Cnot1Q6ZQ08 2375 aaKnown RBP13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Sptbn2Q68FG2 2388 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 A0A1Y7VLU2 103 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 P01739 132 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Znf740Q6NZQ6 180 aa13.56□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Thy1P01831 162 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Spint3Q3UW09 88 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Ighv1-36A0A0A6YXT2 117 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Rbm3O89086 153 aaKnown RBP13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm10881P01642 115 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm10645Q3UPY1 145 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Spink6Q8BT20 105 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Pradc1Q9D9N8 188 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Tmem89Q9DA04 169 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Rbmy1bQ60990 380 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Foxc1Q61572 553 aa13.55□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Tmem258P61166 79 aa13.54□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Mustn1Q99JI1 82 aa13.54□□□□□ -0.24
Col17a1-201ENSMUST00000026045 DnlzQ9D113 177 aa13.54□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Trbv14A0A140T8L9 115 aa13.54□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Lsm4Q9QXA5 137 aaKnown RBP13.54□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Brk1Q91VR8 75 aa13.54□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Trbv17A0A140T8P8 114 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm36368A0A1D5RLK8 91 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Olfr748E9Q9Z0 307 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Atp5eP56382 52 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Lrcol1Q3URS3 161 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Znf146Q8BQN6 292 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm10638F6QEG2 257 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Nlrc5C3VPR6 1915 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Ighv8-8A0A0A6YXQ0 119 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Cpsf4lE9Q2N0 280 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Neurog3P70661 214 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm10604Q3V0X7 143 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Dtx1Q61010 627 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Lypd1Q8BLC3 141 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gtsf1Q9DAN6 167 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 AcacaQ5SWU9 2345 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Igkv6-23A0A140T8N5 115 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Socs3O35718 225 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Muc15Q8C6Z1 331 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Tmem190Q9D2E9 166 aa13.53□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Trav21-dv12A0A075B6C4 109 aa13.52□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gatd1Q8BFQ8 220 aa13.52□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm26558Q8BLW8 286 aa13.52□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Gm8251F6VUT6 1994 aa13.52□□□□□ -0.24
Col17a1-201ENSMUST00000026045 Igkv4-53A0A0G2JFC6 119 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 P01741 114 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 CtsgP28293 261 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Cacna1hO88427 2365 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 3110082J24RikF6Z6Z2 108 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 1700067P10RikG3X8U2 183 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 LitafQ9JLJ0 161 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gm9944Q8C559 102 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gkn1Q9CR36 201 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Ankrd39Q9D2X0 183 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Med13Q5SWW4 2171 aa13.52□□□□□ -0.25
Col17a1-201ENSMUST00000026045 P01655 112 aa13.51□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gm6871L7N248 545 aa13.51□□□□□ -0.25
Col17a1-201ENSMUST00000026045 PspnO70300 156 aa13.51□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Tm2d1Q99MB3 208 aa13.51□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Shisa9Q9CZN4 424 aa13.51□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Snrpd3P62320 126 aaKnown RBP13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gm11733Q8BQP1 125 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gm16381A0A1Y7VKT9 73 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Dnajc13D4AFX7 2248 aaKnown RBP13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gm17727E9Q4V7 109 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Rbfox3Q8BIF2 374 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 P01789 122 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Ntf4Q80VU4 209 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Ifi27l2aQ8R412 90 aa13.5□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Trbv31A0A075B5J5 111 aa13.49□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Inafm1E9PV59 130 aa13.49□□□□□ -0.25
Col17a1-201ENSMUST00000026045 P03980 138 aa13.49□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Trav14-2A0A075B694 121 aa13.49□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Gm12057A0A087WR21 115 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Immp1lQ9CQU8 166 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Trav4n-4A0A075B615 110 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Fam168aQ8BGZ2 244 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Atp6v0e2Q91XE7 81 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Wdr31Q9JHB4 367 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Wisp3D3Z5L9 354 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Defb33Q30KN3 62 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Vwc2lQ505H4 222 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Asxl3Q8C4A5 2259 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 eef1akmt3D3YWP0 232 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 P01793 123 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Tmem213Q08EA8 116 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Rnf115Q9D0C1 305 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 P01794 123 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Pear1Q8VIK5 1034 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Fam216aQ9DB54 251 aa13.48□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Ighv1-26A0A075B5V0 117 aa13.47□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Folr2Q05685 251 aa13.47□□□□□ -0.25
Col17a1-201ENSMUST00000026045 LtaP09225 202 aa13.47□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Cox6a1P43024 111 aa13.47□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Smim26Q3V460 107 aa13.47□□□□□ -0.25
Col17a1-201ENSMUST00000026045 Iglc1A0A0G2JE99 106 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms