RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ube2v1Q9CZY3 147 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Tex48Q9DA81 110 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Cend1Q9JKC6 149 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 MpdzQ8VBX6 2055 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav7n-4A0A075B620 113 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv4-72A0A0B4J1I4 117 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Defb26Q30KN7 186 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ssbp1Q9CYR0 152 aaKnown RBP8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Lsm4Q9QXA5 137 aaKnown RBP8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Tcf24V9GWT9 166 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav8-1A0A075B641 109 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm19345G3UYD9 124 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Rpl35aO55142 110 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Foxl2O88470 375 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Pip4p2Q9CZX7 257 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Tex36Q9D5N9 219 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ubl5Q9EPV8 73 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv4-54A0A0G2JES9 117 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 LeprotO89013 131 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 D930007J09RikQ9D2K6 131 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Shisal2aA2A9G7 189 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Gm20481G3UXK4 153 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Gm43517E9PYS1 339 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Ccl17F6R5P4 103 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Q8C708 225 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Gkn1Q9CR36 201 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Bcl6bO88282 474 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Taf15Q8BQ46 557 aaKnown RBP8.83□□□□□ -1
Ciita-201ENSMUST00000023147 HampQ9EQ21 83 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Gm27027S4R1M6 97 aa8.83□□□□□ -1
Ciita-201ENSMUST00000023147 Igkv4-80A0A075B5L7 116 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 E130218I03RikA0A0U1RNU5 63 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 ElnP54320 860 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Gm10604Q3V0X7 143 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 4930583I09RikQ9D2E3 102 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Igkv8-34A0A0G2JDU0 121 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Tmem141A2AJB2 108 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Erdr1J3QMM0 206 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Dmrtc2Q8CGW9 370 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Ighv1-16A0A075B5U1 98 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Rnf144bQ8BKD6 301 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Ndufs7Q9DC70 224 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 P01811 117 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Tm4sf20Q9CQY8 226 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 PtprqP0C5E4 2300 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 1110002E22RikE0CYV9 1786 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Ighv7-2A0A0A6YX91 119 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 H2al1jA2BFR3 109 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Gm15080A2BI02 449 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Zfp648D3Z0W3 525 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 GhrhP16043 103 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Tdgf1P51865 171 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Znf22Q9ERU3 237 aa8.82□□□□□ -1
Ciita-201ENSMUST00000023147 Ighv1-7A0A075B5T7 117 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Igkv4-58A0A0G2JGI6 119 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Hbb-bsA8DUK4 147 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Gm19684G3UZ45 117 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Hbb-b1P02088 147 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Myod1P10085 318 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Gm12169F2Z474 250 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Gm4894Q8CA09 118 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Lage3Q9CR70 148 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Mapk1ip1Q9D7G9 263 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Rspo1Q9Z132 265 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Dpm2Q9Z324 84 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Ccpg1osV9GXK1 122 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Rif1Q6PR54 2419 aaKnown RBP8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Igkv4-79A0A075B5L8 119 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Igkv14-111A0A140T8P9 117 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 A0A1Y7VLU2 103 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Smim26Q3V460 107 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Wipf2Q6PEV3 440 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Fam19a2Q7TPG7 131 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Ube2e2Q91W82 201 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Ca1P13634 261 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 BmperQ8CJ69 685 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Ankrd39Q9D2X0 183 aa8.81□□□□□ -1
Ciita-201ENSMUST00000023147 Gm28269A0A087WSG3 125 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Tcl1b4P56844 120 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Foxf1Q61080 378 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 PdpnQ62011 172 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Lynx1P0DP60 116 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Mrps21P58059 87 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Gtf3c1Q8K284 2101 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Trav7-2Q5R1I3 112 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Pom121l2Q5SW25 972 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 MycbQ6P8Z1 170 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Shisa9Q9CZN4 424 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Ighv1-36A0A0A6YXT2 117 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Zcchc24B2RVL6 241 aaKnown RBP8.8□□□□□ -1
Ciita-201ENSMUST00000023147 P01680 129 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 P01725 110 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Ccl6P27784 116 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 VsirQ9D659 308 aa8.8□□□□□ -1
Ciita-201ENSMUST00000023147 Igkv3-9A0A140T8P4 119 aa8.79□□□□□ -1
Ciita-201ENSMUST00000023147 Dad1P61804 113 aa8.79□□□□□ -1
Ciita-201ENSMUST00000023147 Jsrp1Q3MI48 332 aa8.79□□□□□ -1
Ciita-201ENSMUST00000023147 Parp4E9PYK3 1969 aa8.79□□□□□ -1
Ciita-201ENSMUST00000023147 Gm10020E9QAZ2 204 aa8.79□□□□□ -1
Ciita-201ENSMUST00000023147 Q80X32 188 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms