RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 MAP1BP46821 2468 aaKnown RBP0.02□□□□□ -2.41
RGPD6-203ENST00000437167 ABCA13Q86UQ4 5058 aa0.02□□□□□ -2.41
RGPD6-203ENST00000437167 EPPK1P58107 5090 aaKnown RBP0.02□□□□□ -2.41
RGPD6-203ENST00000437167 PLXNC1O60486 1568 aa0.02□□□□□ -2.41
RGPD6-203ENST00000437167 HERC1Q15751 4861 aa0.02□□□□□ -2.41
RGPD6-203ENST00000437167 C4AP0C0L4 1744 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 C4BP0C0L5 1744 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 RYR1P21817 5038 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 FASNP49327 2511 aaKnown RBP0.01□□□□□ -2.41
RGPD6-203ENST00000437167 ITPR3Q14573 2671 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 NSD1Q96L73 2696 aaPredicted RBP0.01□□□□□ -2.41
RGPD6-203ENST00000437167 PDZD2O15018 2839 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 TNRC18O15417 2968 aaPredicted RBP0.01□□□□□ -2.41
RGPD6-203ENST00000437167 ADAMTS12P58397 1594 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 RNF17Q9BXT8 1623 aaKnown RBP0.01□□□□□ -2.41
RGPD6-203ENST00000437167 PARP4Q9UKK3 1724 aaKnown RBP0.01□□□□□ -2.41
RGPD6-203ENST00000437167 CREBBPQ92793 2442 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 RYR3Q15413 4870 aa0.01□□□□□ -2.41
RGPD6-203ENST00000437167 H3BVH4 76 aa0□□□□□ -2.41
RGPD6-203ENST00000437167 SPRR2EP22531 72 aa0□□□□□ -2.41
RGPD6-203ENST00000437167 SPRR2AP35326 72 aa0□□□□□ -2.41
RGPD6-203ENST00000437167 LRP1BQ9NZR2 4599 aa0□□□□□ -2.41
RGPD6-203ENST00000437167 LAMA3Q16787 3333 aa-0□□□□□ -2.41
RGPD6-203ENST00000437167 CELSR3Q9NYQ7 3312 aa-0□□□□□ -2.41
RGPD6-203ENST00000437167 BOD1L1Q8NFC6 3051 aa-0□□□□□ -2.41
RGPD6-203ENST00000437167 TENM2Q9NT68 2774 aa-0□□□□□ -2.41
RGPD6-203ENST00000437167 PCNX1Q96RV3 2341 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 ZC3H13Q5T200 1668 aaKnown RBP-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 BIRC6Q9NR09 4857 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 THOC2Q8NI27 1593 aaKnown RBP-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 EFCAB6Q5THR3 1501 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 NBEAL2Q6ZNJ1 2754 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 ACACBO00763 2458 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 MAP1AP78559 2803 aaPredicted RBP-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 USH2AO75445 5202 aa-0.01□□□□□ -2.41
RGPD6-203ENST00000437167 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 NRXN3Q9Y4C0 1643 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 SRCAPQ6ZRS2 3230 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 CNOT1A5YKK6 2376 aaKnown RBP-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 ANKRD11Q6UB99 2663 aaPredicted RBP-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 GCN1Q92616 2671 aaKnown RBP-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 FLNBO75369 2602 aaKnown RBP-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 RNF213Q63HN8 5207 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 DEFA5Q01523 94 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 SMCO4Q9NRQ5 59 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 SONP18583 2426 aaKnown RBP-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 ZFHX4Q86UP3 3567 aa-0.02□□□□□ -2.41
RGPD6-203ENST00000437167 WDFY4Q6ZS81 3184 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 H0YAA0 97 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 MYO9AB2RTY4 2548 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 PREX2Q70Z35 1606 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 IQGAP3Q86VI3 1631 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 HERC2O95714 4834 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 COL12A1Q99715 3063 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 FAT3Q8TDW7 4589 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
RGPD6-203ENST00000437167 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.42
RGPD6-203ENST00000437167 TLN1Q9Y490 2541 aaKnown RBP-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 RIF1Q5UIP0 2472 aaKnown RBP-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 LAMA2P24043 3122 aaKnown RBP-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 ITSN1Q15811 1721 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 DEPDC5O75140 1603 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 MADDQ8WXG6 1647 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 EP400Q96L91 3159 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 CEP350Q5VT06 3117 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 CEP250Q9BV73 2442 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 APC2O95996 2303 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 RELNP78509 3460 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 EYSQ5T1H1 3165 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 RICTORQ6R327 1708 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 MYO5CQ9NQX4 1742 aa-0.04□□□□□ -2.42
RGPD6-203ENST00000437167 MGAM2Q2M2H8 2515 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 UTP20O75691 2785 aaKnown RBP-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 ITPR1Q14643 2758 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 MKI67P46013 3256 aaKnown RBP-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 CFAP46Q8IYW2 2715 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 TRANK1O15050 2925 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 UGGT1Q9NYU2 1555 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 USP9YO00507 2555 aaPredicted RBP-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 MXRA5Q9NR99 2828 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 LMTK2Q8IWU2 1503 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 TLN2Q9Y4G6 2542 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 USP34Q70CQ2 3546 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 ACANP16112 2415 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 CFAP47Q6ZTR5 3102 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 CROCC2H7BZ55 1655 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 WNK1Q9H4A3 2382 aa-0.05□□□□□ -2.42
RGPD6-203ENST00000437167 RANBP2P49792 3224 aaKnown RBP-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 DNAH12Q6ZR08 3092 aa-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 LAMA5O15230 3695 aa-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 LY75O60449 1722 aa-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 DDX60LQ5H9U9 1706 aaKnown RBP-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 DEFB131BA0A096LNP1 70 aa-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 PDCD5O14737 125 aa-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
RGPD6-203ENST00000437167 NBEAL1Q6ZS30 2694 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms