RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 AEBP2Q6ZN18 517 aaPredicted RBP29.64■■■□□ 2.34
RGPD6-203ENST00000437167 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
RGPD6-203ENST00000437167 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
RGPD6-203ENST00000437167 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
RGPD6-203ENST00000437167 FOXD1Q16676 465 aa23.53■■□□□ 1.36
RGPD6-203ENST00000437167 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
RGPD6-203ENST00000437167 ADRA2BP18089 450 aa22.16■■□□□ 1.14
RGPD6-203ENST00000437167 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
RGPD6-203ENST00000437167 PIAS4Q8N2W9 510 aaPredicted RBP22.11■■□□□ 1.13
RGPD6-203ENST00000437167 MSH5O43196 834 aa21.96■■□□□ 1.11
RGPD6-203ENST00000437167 POTEDQ86YR6 584 aa21.07■□□□□ 0.96
RGPD6-203ENST00000437167 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
RGPD6-203ENST00000437167 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
RGPD6-203ENST00000437167 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
RGPD6-203ENST00000437167 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
RGPD6-203ENST00000437167 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.72
RGPD6-203ENST00000437167 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
RGPD6-203ENST00000437167 HOXD11P31277 338 aaPredicted RBP19.37■□□□□ 0.69
RGPD6-203ENST00000437167 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
RGPD6-203ENST00000437167 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
RGPD6-203ENST00000437167 NPM3O75607 178 aaKnown RBP19.02■□□□□ 0.64
RGPD6-203ENST00000437167 KCNA4P22459 653 aa18.87■□□□□ 0.61
RGPD6-203ENST00000437167 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
RGPD6-203ENST00000437167 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
RGPD6-203ENST00000437167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
RGPD6-203ENST00000437167 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
RGPD6-203ENST00000437167 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
RGPD6-203ENST00000437167 U3KPZ7 1027 aaPredicted RBP18.15■□□□□ 0.5
RGPD6-203ENST00000437167 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
RGPD6-203ENST00000437167 CAPN15O75808 1086 aa17.89■□□□□ 0.45
RGPD6-203ENST00000437167 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
RGPD6-203ENST00000437167 SPINK5Q9NQ38 1064 aaPredicted RBP17.86■□□□□ 0.45
RGPD6-203ENST00000437167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
RGPD6-203ENST00000437167 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
RGPD6-203ENST00000437167 APLP2Q06481 763 aa17.73■□□□□ 0.43
RGPD6-203ENST00000437167 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
RGPD6-203ENST00000437167 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
RGPD6-203ENST00000437167 DSG3P32926 999 aa17.62■□□□□ 0.41
RGPD6-203ENST00000437167 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
RGPD6-203ENST00000437167 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
RGPD6-203ENST00000437167 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
RGPD6-203ENST00000437167 ABCB7O75027 752 aa17.49■□□□□ 0.39
RGPD6-203ENST00000437167 ZBTB22O15209 634 aa17.3■□□□□ 0.36
RGPD6-203ENST00000437167 POLA2Q14181 598 aa17.18■□□□□ 0.34
RGPD6-203ENST00000437167 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
RGPD6-203ENST00000437167 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
RGPD6-203ENST00000437167 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
RGPD6-203ENST00000437167 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
RGPD6-203ENST00000437167 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
RGPD6-203ENST00000437167 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
RGPD6-203ENST00000437167 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
RGPD6-203ENST00000437167 POTEHQ6S545 545 aa16.58■□□□□ 0.24
RGPD6-203ENST00000437167 FBLN2P98095 1184 aa16.56■□□□□ 0.24
RGPD6-203ENST00000437167 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
RGPD6-203ENST00000437167 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
RGPD6-203ENST00000437167 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
RGPD6-203ENST00000437167 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
RGPD6-203ENST00000437167 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
RGPD6-203ENST00000437167 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
RGPD6-203ENST00000437167 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
RGPD6-203ENST00000437167 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
RGPD6-203ENST00000437167 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
RGPD6-203ENST00000437167 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
RGPD6-203ENST00000437167 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
RGPD6-203ENST00000437167 PIP4P2Q8N4L2 257 aa16.04■□□□□ 0.16
RGPD6-203ENST00000437167 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
RGPD6-203ENST00000437167 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
RGPD6-203ENST00000437167 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
RGPD6-203ENST00000437167 PRKAR2AP13861 404 aaKnown RBP15.79■□□□□ 0.12
RGPD6-203ENST00000437167 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
RGPD6-203ENST00000437167 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
RGPD6-203ENST00000437167 HAX1O00165 279 aa15.77■□□□□ 0.12
RGPD6-203ENST00000437167 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
RGPD6-203ENST00000437167 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
RGPD6-203ENST00000437167 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
RGPD6-203ENST00000437167 EVX2Q03828 476 aa15.5■□□□□ 0.07
RGPD6-203ENST00000437167 C19orf67A6NJJ6 358 aa15.42■□□□□ 0.06
RGPD6-203ENST00000437167 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
RGPD6-203ENST00000437167 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
RGPD6-203ENST00000437167 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
RGPD6-203ENST00000437167 PROM2Q8N271 834 aa15.28■□□□□ 0.04
RGPD6-203ENST00000437167 FKBP8Q14318 412 aa15.25■□□□□ 0.03
RGPD6-203ENST00000437167 GABBR2O75899 941 aa15.19■□□□□ 0.02
RGPD6-203ENST00000437167 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
RGPD6-203ENST00000437167 ZRANB1Q9UGI0 708 aa15.15■□□□□ 0.02
RGPD6-203ENST00000437167 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
RGPD6-203ENST00000437167 PLEKHG5O94827 1062 aa15.08■□□□□ 0
RGPD6-203ENST00000437167 MIER1Q8N108 512 aa15.08■□□□□ 0
RGPD6-203ENST00000437167 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
RGPD6-203ENST00000437167 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
RGPD6-203ENST00000437167 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
RGPD6-203ENST00000437167 CLCN6P51797 869 aa14.96□□□□□ -0.01
RGPD6-203ENST00000437167 PHF12Q96QT6 1004 aa14.93□□□□□ -0.02
RGPD6-203ENST00000437167 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
RGPD6-203ENST00000437167 DCBLD2Q96PD2 775 aa14.9□□□□□ -0.02
RGPD6-203ENST00000437167 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
RGPD6-203ENST00000437167 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
RGPD6-203ENST00000437167 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
RGPD6-203ENST00000437167 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
RGPD6-203ENST00000437167 RASEFQ8IZ41 740 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms