RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 H2al2bA9Z055 111 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 MsmpB1AWI6 139 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Zfp983E9PUT0 460 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 P01801 115 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 SeleQ00690 612 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Usmg5Q78IK2 58 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Hapln4Q80WM4 400 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Ifitm2Q99J93 144 aa11.19□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Defa-rs7P50715 91 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Tnrc6aQ3UHK8 1896 aaKnown RBP11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Ep300B2RWS6 2412 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Trav14n-3A0A075B645 120 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm933J3QPC1 141 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 A230072I06RikQ3UUJ8 172 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 GlrxQ9QUH0 107 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Trav16d-dv11A0A075B617 117 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Dmrtc2Q8CGW9 370 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Vmn1r216Q8R257 298 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Iah1Q9DB29 249 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 GalmQ8K157 342 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 LitafQ9JLJ0 161 aa11.18□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Arhgap21Q6DFV3 1944 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 MycbQ6P8Z1 170 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 COA4Q8BT51 87 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Klhdc3Q8VEM9 382 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Tet2Q4JK59 1912 aaKnown RBP11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm9970F6ZED4 185 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Ube2e1P52482 193 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Pom121l2Q5SW25 972 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Ighv8-6A0A0A6YXA3 118 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 OtorQ9JIE3 128 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Dock10Q8BZN6 2150 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm29644A0A087WPG2 191 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Khdc1cQ4KL78 166 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm1553Q66VB7 94 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Rbfox3Q8BIF2 374 aa11.17□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Trav2Q5R1I9 109 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm4763Q8CFJ5 196 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm94Q3V2D2 93 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Prima1Q810F0 153 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 TdhQ8K3F7 373 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Immp1lQ9CQU8 166 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Fer1l4A3KGK3 1992 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Fam240bJ3QMB3 78 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 P01630 113 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 RetnQ99P87 114 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Ndufc2Q9CQ54 120 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Trav19A0A0B4J1K4 119 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Tomm40Q9QYA2 361 aa11.16□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm28778A0A087WSK7 233 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Olfr748E9Q9Z0 307 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm10020E9QAZ2 204 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Lynx1P0DP60 116 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Rpl15Q9CZM2 204 aaKnown RBP11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Tmem141A2AJB2 108 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Gm12888Q3UW77 119 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Sp5Q9JHX2 398 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Iba57Q8CAK1 358 aaKnown RBP11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Lyzl1Q9CPX3 148 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Nckap5E9QAE1 1909 aa11.15□□□□□ -0.62
Pcdha1-202ENSMUST00000193839 Saa4P31532 130 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Spink2Q8BMY7 86 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm16686Q3UMN9 131 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Ccl12Q62401 104 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 P01802 115 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Cks1bP61025 79 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 CstadQ9D245 104 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Zfp950A0A0U1RQ46 609 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm20517G3UVU6 152 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Obox1Q9D350 204 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Fhl3Q9R059 289 aa11.14□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tdgf1P51865 171 aa11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Hint1P70349 126 aaKnown RBP11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Trbv31A0A075B5J5 111 aa11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm6793B2RXM2 351 aa11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Nsun4C4P6S0 806 aaKnown RBP11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Pde6hP61249 83 aa11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tm4sf20Q9CQY8 226 aa11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 ArtnQ9Z0L2 224 aa11.13□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Trav21-dv12A0A075B6C4 109 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm15091B1AZM2 449 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Dmrt3Q80WT2 476 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Dennd4cA6H8H2 1906 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Olfr1381Q7TQT4 311 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Olfr1373Q7TQT6 311 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Igfbpl1Q80W15 270 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Hist1h1tQ07133 208 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 D130052B06RikQ3UW13 202 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Ighv1-62-2A0A0A6YXZ4 119 aa11.12□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm15217A2CG07 155 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm17732E9Q5I2 61 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 TcraP01849 138 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gtsf1lQ9CWD0 151 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 CadB2RQC6 2225 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm37988J3QM41 62 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 SonQ9QX47 2444 aaKnown RBP11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Greb1Q3UHK3 1954 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Igkv14-130A0A0G2JF45 117 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 IappP12968 93 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Klk7Q91VE3 249 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms