RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Ighv3-1A0A075B5S6 116 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Olfr1192-ps1A0A1L1SRD7 309 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 A0A286YCQ8 80 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Cldn34c4A2ANA3 212 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Zfp983E9PUT0 460 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Aqp7O54794 303 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 P01726 129 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Cd3eP22646 189 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 PlaurP35456 327 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 H2al1nQ497L1 109 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 SriQ6P069 198 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 OstcQ78XF5 149 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Znf641Q8BZ34 422 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Trav21-dv12A0A075B6C4 109 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Gm21983D6RFS9 131 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Saa3P04918 122 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Rab24P35290 203 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Ypel3P61237 119 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 AsipQ03288 131 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Shisal1Q0VBP7 198 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Gpr87Q99MT7 358 aa8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Dazap1Q9JII5 406 aaKnown RBP8.35□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Tm4sf19E9Q9H8 206 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 P01748 117 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Fabp4P04117 132 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Defa-rs1P17533 116 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 B430305J03RikQ8BQQ8 176 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 5930422O12RikQ8C4Y4 123 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Tnfrsf13cQ9D8D0 175 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Wfdc15bQ9JHY4 80 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Shisal2aA2A9G7 189 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Smim6Q3U0I6 56 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Fa2hQ5MPP0 372 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Trpt1Q8K3A2 249 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Olfr873Q8VFJ0 319 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Olfr1339Q8VGB1 315 aa8.34□□□□□ -1.07
Pcdh20-202ENSMUST00000192557 Gm5468Q8C3D3 155 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Rasl11bQ922H7 247 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Necap1Q9CR95 275 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Ndfip1Q8R0W6 221 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Akap13E9Q394 2776 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Ighv1-4A0A075B5T4 117 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Amn1B8JKV0 258 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 P01820 115 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Cited1P97769 203 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Atp5iQ06185 71 aaKnown RBP8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Gm10775Q3V290 127 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 IqcjQ8BPW0 110 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 GlmpQ9JHJ3 404 aa8.33□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Trav7n-4A0A075B620 113 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Rpl11Q9CXW4 178 aaKnown RBP8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 1700008P02RikQ9DAJ8 175 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Trav16A0A075B653 116 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 D830044I16RikA0A1D5RM53 117 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Rtl10D3YWW5 146 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr218E9PWV2 313 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Gm21994F6T2D2 329 aa8.32□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Ighv1-74A0A0G2JGK2 117 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Timm8bP62077 83 aaKnown RBP8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Arl14eplQ3UKZ7 152 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr477Q8VGI6 310 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Tmem189Q99LQ7 271 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Tenm3Q9WTS6 2715 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr235E9Q9Z6 312 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Gm9602J3QPD5 205 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 ColqO35348 457 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 CampP51437 172 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Prr9Q8BV84 116 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Tmem129Q8K304 362 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr810Q8VFH9 312 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 HeylQ9DBX7 326 aa8.31□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Prrc2aQ7TSC1 2158 aaKnown RBP8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Igkv4-90A0A075B5L3 117 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Tcrg-C2A0A075B5Z2 167 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Ighv1-77A0A0G2JGS9 117 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Ebi3O35228 228 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 P01853 167 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Mbd3l2Q3UXB0 228 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Fam19a2Q7TPG7 131 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Gm5105Q8C6Y9 112 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Kcnk5Q9JK62 502 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Arl3Q9WUL7 182 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Trav12d-3A0A075B6A4 115 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Mettl23A2AA28 253 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Gm5218F6YH22 154 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Gm15056F6ZR08 88 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 MsmbO08540 113 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 CrygbP04344 175 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Mfge8P21956 463 aaKnown RBP8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Defb2P82020 71 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Siah2Q06986 325 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Hist2h2beQ64524 126 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Ndufv3Q8BK30 104 aaKnown RBP8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 FlnbQ80X90 2602 aaKnown RBP8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr1381Q7TQT4 311 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr1380Q7TQT5 311 aa8.3□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Trav14n-3A0A075B645 120 aa8.29□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr1293-psA0A1L1SVB5 326 aa8.29□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Olfr1116E9PXB8 307 aa8.29□□□□□ -1.08
Pcdh20-202ENSMUST00000192557 Scgb2a2J3KMP9 96 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms