RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Tmprss5Q9ER04 455 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 Cbln1Q9R171 193 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 Tas2r114Q7M722 309 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr715bE9Q725 315 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Tac3P55099 116 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 H2-DMb2Q31099 261 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Trav2Q5R1I9 109 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Wfdc15bQ9JHY4 80 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Shisal2aA2A9G7 189 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm6096D3YTY6 151 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Tm4sf19E9Q9H8 206 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm3072F6SKY8 209 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm17654F7AXR3 209 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Twist1P26687 206 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm16686Q3UMN9 131 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr16Q62007 309 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Mrpl33Q9CQP0 65 aa11.42□□□□□ -0.58
Nup88-202ENSMUST00000108530 Cldn34c4A2ANA3 212 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Ccl17F6R5P4 103 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Cited2O35740 269 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Rpp30O88796 268 aaKnown RBP11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Saa4P31532 130 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Timp3P39876 211 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Znf48Q3US17 591 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Slc17a2Q5SZA1 478 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Prss3Q792Z0 246 aaKnown RBP11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Tenm3Q9WTS6 2715 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Trbv1A0A0B4J1G7 116 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr218E9PWV2 313 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm6871L7N248 545 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr1373Q7TQT6 311 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Q8C3M9 231 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr981Q8VEU2 310 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 MNCb-2875Q9DCB3 74 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm14214V9GX35 225 aa11.41□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr1118A0A0J9YUE7 307 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Zfp825A0A1Y7VK00 292 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm6970F7DCP6 221 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 S100a10P08207 97 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Nutf2P61971 127 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Psg25Q497W1 475 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Ndfip1Q8R0W6 221 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Lyzl1Q9CPX3 148 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Cnn3Q9DAW9 330 aaKnown RBP11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Epg5Q80TA9 2572 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm5089A1L3C8 106 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Foxi3E0CZH3 425 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm5218F6YH22 154 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 PigyP0C1P0 71 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Siah2Q06986 325 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Mbd3l2Q3UXB0 228 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 OstcQ78XF5 149 aa11.4□□□□□ -0.58
Nup88-202ENSMUST00000108530 Ighv1-22A0A075B5U7 117 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr1192-ps1A0A1L1SRD7 309 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Zfp979A2A799 407 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Duxbl2Q7TNE6 350 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Ndufv3Q8BK30 104 aaKnown RBP11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm9961Q8BNV2 113 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Uqcc3Q8K2T4 89 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Prelid1Q8R107 217 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Arl3Q9WUL7 182 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Myo18bE9PV66 2605 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Trav7-4A0A075B6C1 113 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Trav7d-4Q5R1H9 113 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Cdpf1Q8R3A2 119 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr983Q8VG90 315 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Bub3Q9WVA3 326 aa11.39□□□□□ -0.59
Nup88-202ENSMUST00000108530 Trav21-dv12A0A075B6C4 109 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Mettl23A2AA28 253 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm10226O88253 85 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Fgf5P15656 264 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Rab4bQ91ZR1 213 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gpr87Q99MT7 358 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Usp9yF8VPU6 2556 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Cfc1P97766 202 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Ripply2Q2WG76 128 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr477Q8VGI6 310 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 CcsQ9WU84 274 aa11.38□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm14325A2AW67 498 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr235E9Q9Z6 312 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm3512L7N206 146 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Saa3P04918 122 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr904Q7TRC9 310 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Spock3Q8BKV0 436 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm10190Q8BSD7 107 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Kcnk5Q9JK62 502 aa11.37□□□□□ -0.59
Nup88-202ENSMUST00000108530 Scgb1b15A0A087WP50 93 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm21983D6RFS9 131 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr1185-ps1F6XP16 303 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm4133K9J7G6 307 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Socs3O35718 225 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 CampP51437 172 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Fbxl15Q91W61 300 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Pam16Q9CQV1 125 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Xirp2Q4U4S6 3784 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 MsmbO08540 113 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Spink10Q8CAC8 162 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr1404Q8VGE1 313 aa11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Btf3l4Q9CQH7 158 aaKnown RBP11.36□□□□□ -0.59
Nup88-202ENSMUST00000108530 Olfr1320A2AHM8 319 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms