RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Edn1P22387 202 aa12.27□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 GrnP28798 589 aaKnown RBP12.27□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Cd99Q8VCN6 175 aa12.27□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 GlrxQ9QUH0 107 aa12.27□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 ColqO35348 457 aa12.27□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm815Q3UWS2 115 aa12.27□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm29289A0A087WPY7 166 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm4064A0A087WR82 380 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm10352B2RWR6 380 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm21693J3QK27 380 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Rbmy1a1O35698 380 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Crlf1Q9JM58 425 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Rpl32P62911 135 aaKnown RBP12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Taf15Q8BQ46 557 aaKnown RBP12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Anapc10Q8K2H6 185 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Q8CF25 301 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Pear1Q8VIK5 1034 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Dppa2Q9CWH0 301 aa12.26□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Igkv4-59A0A0B4J1I8 117 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Ppp1r32Q148A4 427 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Bcorl1A2AQH4 1781 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Igkv4-61A0A0G2JH00 117 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Shisal2aA2A9G7 189 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Lamtor3O88653 124 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Ighv8-6A0A0A6YXA3 118 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Dnase2P56542 353 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Itgb4A2A863 1818 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Timp3P39876 211 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm6040Q4QY32 63 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Lypd1Q8BLC3 141 aa12.25□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Reg3gO09049 174 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Rnf183Q8QZS5 190 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Reg3dQ9QUS9 175 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm9961Q8BNV2 113 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Ifitm5O88728 134 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Defa2P28309 93 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 TprF6ZDS4 2431 aaKnown RBP12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm21994F6T2D2 329 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Olfr433Q7TRV9 314 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 EtdQ80SW5 59 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Phf3B2RQG2 2025 aaKnown RBP12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 StrcQ8VIM6 1809 aa12.24□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 E130218I03RikA0A0U1RNU5 63 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Tpsg1Q9QUL7 311 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 A0A286YE02 88 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 P01738 130 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Dock4P59764 1978 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm12355A2A4X6 163 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Iglc2P01844 104 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Srsf3P84104 164 aaKnown RBP12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm10188Q3V432 135 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Trav3-3Q5R1C3 114 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Klk11Q9QYN3 276 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Akap6E9Q9K8 2307 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Fhl1P97447 280 aaKnown RBP12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Tmem170aQ9D342 144 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 P06330 118 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Tmem256Q5F285 113 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 F930015N05RikQ8C3A3 210 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Igkv4-72A0A0B4J1I4 117 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 ApomQ9Z1R3 190 aa12.23□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Igkv19-93A0A0G2JFZ3 115 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 4930546C10RikE9Q4Y3 121 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Megf10Q6DIB5 1147 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Minos1Q7TNS2 76 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Ankrd39Q9D2X0 183 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Synj2bpQ9D6K5 145 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 OtorQ9JIE3 128 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Tomm40Q9QYA2 361 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Arid2E9Q7E2 1828 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 P01811 117 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Supt4h1bQ9Z199 117 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Nup214Q80U93 2085 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Tmem30bQ8BHG3 353 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Obsl1D3YYU8 1804 aaKnown RBP12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Kif26bQ7TNC6 2112 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 P01788 123 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Hoxd3P09027 433 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm26938S4R185 226 aa12.22□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm21616B6ZB74 166 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Lcn2P11672 200 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Foxs1Q61574 329 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Chac1Q8R3J5 223 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Mrpl53Q9D1H8 118 aaKnown RBP12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm7102J3QQ10 178 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Q80X32 188 aaKnown RBP12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 AcacaQ5SWU9 2345 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Defb18Q30KP5 85 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 C1qtnf9Q4ZJN1 333 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Gm9913Q8BQQ2 135 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Atp23Q9CWQ3 201 aa12.21□□□□□ -0.45
Ccdc50-203ENSMUST00000100026 Ighv5-9-1A0A0A6YVS4 126 aa12.21□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 Gm20458E9PXJ7 78 aa12.21□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 Tcrg-V5A0A0G2JGV5 113 aa12.2□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 SostQ99P68 211 aa12.2□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 Psmg3Q9CZH3 122 aa12.2□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 Gm26727M0QWT1 121 aa12.2□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 Q91WE4 72 aa12.2□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 Dpm3Q9D1Q4 92 aa12.2□□□□□ -0.46
Ccdc50-203ENSMUST00000100026 PpbpQ9EQI5 113 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms