Protein–RNA interactions for Protein: Q80SW5

Etd, ETD, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EtdQ80SW5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
EtdQ80SW5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,25■■□□□ 1,79
EtdQ80SW5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
EtdQ80SW5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
EtdQ80SW5 Psd-208ENSMUST00000224556 2034 ntBASIC25,75■■□□□ 1,71
EtdQ80SW5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
EtdQ80SW5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,61■■□□□ 1,53
EtdQ80SW5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
EtdQ80SW5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
EtdQ80SW5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,43■■□□□ 1,5
EtdQ80SW5 Gm25239-201ENSMUST00000174915 86 ntBASIC24,42■■□□□ 1,5
EtdQ80SW5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,38■■□□□ 1,49
EtdQ80SW5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
EtdQ80SW5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,33■■□□□ 1,49
EtdQ80SW5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,45
EtdQ80SW5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
EtdQ80SW5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,11■■□□□ 1,45
EtdQ80SW5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,09■■□□□ 1,45
EtdQ80SW5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
EtdQ80SW5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,57■■□□□ 1,36
EtdQ80SW5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,55■■□□□ 1,36
EtdQ80SW5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,47■■□□□ 1,35
EtdQ80SW5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,41■■□□□ 1,34
EtdQ80SW5 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,41■■□□□ 1,34
EtdQ80SW5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,36■■□□□ 1,33
EtdQ80SW5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
EtdQ80SW5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
EtdQ80SW5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,3■■□□□ 1,32
EtdQ80SW5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,28■■□□□ 1,32
EtdQ80SW5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
EtdQ80SW5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,21■■□□□ 1,31
EtdQ80SW5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,13■■□□□ 1,29
EtdQ80SW5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,96■■□□□ 1,27
EtdQ80SW5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,91■■□□□ 1,26
EtdQ80SW5 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,9■■□□□ 1,26
EtdQ80SW5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,85■■□□□ 1,25
EtdQ80SW5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,84■■□□□ 1,25
EtdQ80SW5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,8■■□□□ 1,24
EtdQ80SW5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
EtdQ80SW5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,76■■□□□ 1,23
EtdQ80SW5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,72■■□□□ 1,23
EtdQ80SW5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,63■■□□□ 1,21
EtdQ80SW5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,62■■□□□ 1,21
EtdQ80SW5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
EtdQ80SW5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,52■■□□□ 1,2
EtdQ80SW5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,51■■□□□ 1,19
EtdQ80SW5 Gm15042-201ENSMUST00000120212 883 ntBASIC22,51■■□□□ 1,19
EtdQ80SW5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,44■■□□□ 1,18
EtdQ80SW5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
EtdQ80SW5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,36■■□□□ 1,17
EtdQ80SW5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,36■■□□□ 1,17
EtdQ80SW5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,36■■□□□ 1,17
EtdQ80SW5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
EtdQ80SW5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,28■■□□□ 1,16
EtdQ80SW5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,15
EtdQ80SW5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,26■■□□□ 1,15
EtdQ80SW5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,26■■□□□ 1,15
EtdQ80SW5 Gm15045-201ENSMUST00000117359 883 ntBASIC22,21■■□□□ 1,15
EtdQ80SW5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22,19■■□□□ 1,14
EtdQ80SW5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,18■■□□□ 1,14
EtdQ80SW5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,17■■□□□ 1,14
EtdQ80SW5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22,14■■□□□ 1,13
EtdQ80SW5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,13
EtdQ80SW5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,11■■□□□ 1,13
EtdQ80SW5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
EtdQ80SW5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,07■■□□□ 1,12
EtdQ80SW5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
EtdQ80SW5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
EtdQ80SW5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,02■■□□□ 1,12
EtdQ80SW5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,11
EtdQ80SW5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
EtdQ80SW5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1,11
EtdQ80SW5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22■■□□□ 1,11
EtdQ80SW5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
EtdQ80SW5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,98■■□□□ 1,11
EtdQ80SW5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,94■■□□□ 1,1
EtdQ80SW5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,93■■□□□ 1,1
EtdQ80SW5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
EtdQ80SW5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,89■■□□□ 1,09
EtdQ80SW5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
EtdQ80SW5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,82■■□□□ 1,08
EtdQ80SW5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21,79■■□□□ 1,08
EtdQ80SW5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
EtdQ80SW5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,08
EtdQ80SW5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21,76■■□□□ 1,07
EtdQ80SW5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
EtdQ80SW5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,75■■□□□ 1,07
EtdQ80SW5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,74■■□□□ 1,07
EtdQ80SW5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,69■■□□□ 1,06
EtdQ80SW5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,66■■□□□ 1,06
EtdQ80SW5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
EtdQ80SW5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21,64■■□□□ 1,05
EtdQ80SW5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
EtdQ80SW5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,51■■□□□ 1,03
EtdQ80SW5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,45■■□□□ 1,02
EtdQ80SW5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21,42■■□□□ 1,02
EtdQ80SW5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,4■■□□□ 1,02
EtdQ80SW5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
EtdQ80SW5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
EtdQ80SW5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21,34■■□□□ 1,01
Retrieved 100 of 76,532 protein–RNA pairs in 13,8 ms