RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Ank3G5E8K5 1961 aa8.32□□□□□ -1.08
Lig4-201ENSMUST00000095476 Cpsf4lE9Q2N0 280 aa8.32□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm10803Q3TZS6 135 aa8.32□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm7489Q3UT34 171 aa8.32□□□□□ -1.08
Lig4-201ENSMUST00000095476 Dock7Q8R1A4 2130 aaKnown RBP8.32□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm5089A1L3C8 106 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 P01811 117 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Zc3h3Q8CHP0 950 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Plxna3P70208 1872 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Igkv13-85A0A075B666 115 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trav21-dv12A0A075B6C4 109 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm26602M0QWA4 95 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Xcl1P47993 114 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 4931428L18RikQ9D4S9 127 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Pcdh15Q99PJ1 1943 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 P01736 120 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Spink10Q8CAC8 162 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Cacna1hO88427 2365 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm17727E9Q4V7 109 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Tnfrsf13bQ9ET35 249 aa8.31□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trav7-1A0A0G2JEV5 112 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Znf691Q3TDE8 283 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ubald2Q8BQH4 164 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Mfap4Q9D1H9 257 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Them7Q9DCP4 223 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Igkv14-100A0A0G2JG36 117 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Hist1h4aP62806 103 aaKnown RBP8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trbv14A0A140T8L9 115 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Cox6a1P43024 111 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trav6d-4Q5R1I0 115 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Olfr1199Q8VF94 310 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Mrpl16Q99N93 251 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trav14-2A0A075B694 121 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Smim20D3Z7Q2 69 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 NdpP48744 131 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Zc2hc1aQ8BJH1 324 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Rnf125Q9D9R0 233 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ncor1Q60974 2453 aa8.3□□□□□ -1.08
Lig4-201ENSMUST00000095476 Runx1Q03347 451 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Pglyrp4Q0VB07 374 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Phlda3Q9WV95 125 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Nlrc5C3VPR6 1915 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ighv14-1A0A075B5R4 117 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ighv8-8A0A0A6YXQ0 119 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm10521E9PZK0 135 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 PmvkQ9D1G2 192 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Clec5aQ9R007 190 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Snrpd3P62320 126 aaKnown RBP8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm26558Q8BLW8 286 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Foxi1Q922I5 372 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Tmem219Q9D123 240 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ighv1-7A0A075B5T7 117 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 P01792 123 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 P01793 123 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gkn1Q9CR36 201 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Rspo1Q9Z132 265 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Tcf24V9GWT9 166 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 UtrnE9Q6R7 3430 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Malrd1A2AJX4 2123 aa8.29□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm11020F6ZGD5 61 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Wdr86D3Z757 380 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 P01783 136 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Pradc1Q9D9N8 188 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Dusp14Q9JLY7 198 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ighv1-19A0A0A6YWX0 117 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ighv9-3A0A0B4J1J5 117 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trbv17A0A140T8P8 114 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 CrygbP04344 175 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Pde6hP61249 83 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Tmem30bQ8BHG3 353 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Cysltr1Q99JA4 352 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 LctF8VPT3 1931 aa8.28□□□□□ -1.08
Lig4-201ENSMUST00000095476 Trav14d-1A0A075B6B1 121 aa8.27□□□□□ -1.08
Lig4-201ENSMUST00000095476 Gm17660B9UIU9 90 aa8.27□□□□□ -1.08
Lig4-201ENSMUST00000095476 Mzt1Q8BUR9 78 aa8.27□□□□□ -1.08
Lig4-201ENSMUST00000095476 Ighv8-4A0A0A6YW26 117 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Sod1P08228 154 aaKnown RBP8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Spint3Q3UW09 88 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 BB014433Q8C5R5 389 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 SpinklQ8CEK3 90 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Ifitm2Q99J93 144 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 ApomQ9Z1R3 190 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Greb1Q3UHK3 1954 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Asphd1Q2TA57 360 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Tmem88bQ3TYP4 173 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Ss18l1Q8BW22 402 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Dock10Q8BZN6 2150 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Trav9-1A0A075B601 112 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Gm4792Q569Q2 183 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Rbfox3Q8BIF2 374 aa8.27□□□□□ -1.09
Lig4-201ENSMUST00000095476 Trav4n-4A0A075B615 110 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Thy1P01831 162 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 P0C1Z5 52 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Ube2zQ3UE37 356 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Shank1D3YZU1 2167 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Casp8ap2Q9WUF3 1962 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Qrich2A0A140LIY9 2337 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Abca7Q91V24 2159 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Gm33815A0A087WNV3 176 aa8.26□□□□□ -1.09
Lig4-201ENSMUST00000095476 Gm10645Q3UPY1 145 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms