RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 P01789 122 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Pde6hP61249 83 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 9430097D07RikQ8BS47 195 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ovol2Q8CIV7 274 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Hist1h2bmP10854 126 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Bsph2Q0Q236 131 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Hist1h2bhQ64478 126 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Hist2h2bbQ64525 126 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Lrp4Q8VI56 1905 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm6812B1AXU1 112 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 PigyP0C1P0 71 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm7489Q3UT34 171 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tns1E9Q0S6 1888 aaKnown RBP9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Nrn1Q8CFV4 142 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm17677B3GLJ5 116 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 G0s2Q61585 103 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Lhfpl1Q80SV1 220 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Fbxl15Q91W61 300 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Spaca3Q9D9X8 221 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Col6a6Q8C6K9 2265 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 A0A1Y7VMQ4 148 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tmem141A2AJB2 108 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm13030A2APQ6 143 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ly86O88188 162 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tspo2Q9CRZ8 162 aa9.43□□□□□ -0.9
Pcif1-201ENSMUST00000041643 P04942 107 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Wt1P22561 449 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Fbln7Q501P1 440 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Zfp248Q640N4 576 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Fam19a2Q7TPG7 131 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Defa22Q8C1N8 93 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Olfr1323Q8VF35 309 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Sumo2P61957 95 aaKnown RBP9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 4930544G11RikQ9CR99 193 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Mmp23O88676 391 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Id3P41133 119 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Cmc4Q61908 68 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Prelid3aQ8VE85 172 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Arfgef3Q3UGY8 2170 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm5089A1L3C8 106 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm10130F6ZHM5 101 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Scgb1b3J3QJY4 93 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 MycbQ6P8Z1 170 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 GgctQ9D7X8 188 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tomm40Q9QYA2 361 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm27027S4R1M6 97 aa9.42□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Spink1P09036 80 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Pmis2Q497Q9 96 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Olfr149Q60888 311 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Srsf1Q6PDM2 248 aaKnown RBP9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Fam110dQ80X91 271 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Prss29Q99MS4 279 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gkn1Q9CR36 201 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 CompQ9R0G6 755 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 PoleQ9WVF7 2283 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Olfr322Q5NCC8 327 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ube2e2Q91W82 201 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ccl24Q9JKC0 119 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ighv1-74A0A0G2JGK2 117 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 BatfO35284 125 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 P01643 108 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tmem136Q3TYE7 245 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ifitm10Q8BR26 201 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Rab37Q9JKM7 223 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Igfbpl1Q80W15 270 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Cd300eQ8K249 196 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gtsf1Q9DAN6 167 aa9.41□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Pygo2Q80V76 405 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Dpm3Q9D1Q4 92 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 E030018B13RikJ3QMS9 113 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Aqp7O54794 303 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Pex7P97865 318 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tmem241Q3UME2 297 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Prr3Q811B5 190 aaKnown RBP9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Dock10Q8BZN6 2150 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Trav16d-dv11A0A075B617 117 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm9944Q8C559 102 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Cby1Q9D1C2 127 aa9.4□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Znf329Q6GQR8 522 aa9.4□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Olfr33Q8VGX7 318 aa9.4□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Q9D727 114 aa9.4□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Dnal4Q9DCM4 105 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Trav14n-3A0A075B645 120 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Olfr904Q7TRC9 310 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Q3UNZ8 350 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Taf15Q8BQ46 557 aaKnown RBP9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Ifi27l2aQ8R412 90 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Trbv3A0A0A6YYE2 117 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm15128A2ADW8 449 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm15093A2BI72 449 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Luzp4B1AV09 449 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm15107B1B0X0 449 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm15097E9QA14 449 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Gm15085Q62012 449 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Cysltr1Q99JA4 352 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Tnfrsf13bQ9ET35 249 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 CirbpP60824 172 aaKnown RBP9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Atg101Q9D8Z6 218 aa9.39□□□□□ -0.91
Pcif1-201ENSMUST00000041643 Itgb1bp1O35671 200 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 89.8 ms