RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ATP7BP35670 1465 aa-0.28□□□□□ -2.45
NSMCE4A-210ENST00000483541 A0A1B0GUT8 65 aa-0.28□□□□□ -2.45
NSMCE4A-210ENST00000483541 CYB5AP00167 134 aa-0.28□□□□□ -2.45
NSMCE4A-210ENST00000483541 COX7BP24311 80 aa-0.28□□□□□ -2.45
NSMCE4A-210ENST00000483541 C9orf62Q8N4C0 152 aa-0.28□□□□□ -2.45
NSMCE4A-210ENST00000483541 MUC2Q02817 5179 aa-0.28□□□□□ -2.45
NSMCE4A-210ENST00000483541 LTN1O94822 1766 aa-0.29□□□□□ -2.46
NSMCE4A-210ENST00000483541 PPLO60437 1756 aa-0.29□□□□□ -2.46
NSMCE4A-210ENST00000483541 NEXMIFQ5QGS0 1516 aa-0.3□□□□□ -2.46
NSMCE4A-210ENST00000483541 PRKDCP78527 4128 aaKnown RBP-0.3□□□□□ -2.46
NSMCE4A-210ENST00000483541 POLR1AO95602 1720 aaPredicted RBP-0.3□□□□□ -2.46
NSMCE4A-210ENST00000483541 PDZD2O15018 2839 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 IQCF6A8MYZ5 107 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 LELP1Q5T871 98 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 WFDC13Q8IUB5 93 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 V9GYS6 101 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 C4AP0C0L4 1744 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 C4BP0C0L5 1744 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 TMEM131LA2VDJ0 1609 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 MAP3K4Q9Y6R4 1608 aa-0.31□□□□□ -2.46
NSMCE4A-210ENST00000483541 TRANK1O15050 2925 aa-0.32□□□□□ -2.46
NSMCE4A-210ENST00000483541 GAFA1Q96PS6 74 aa-0.32□□□□□ -2.46
NSMCE4A-210ENST00000483541 KIF14Q15058 1648 aa-0.32□□□□□ -2.46
NSMCE4A-210ENST00000483541 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
NSMCE4A-210ENST00000483541 PYY3Q5JQD4 70 aa-0.33□□□□□ -2.46
NSMCE4A-210ENST00000483541 SPG11Q96JI7 2443 aa-0.33□□□□□ -2.46
NSMCE4A-210ENST00000483541 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
NSMCE4A-210ENST00000483541 RYR3Q15413 4870 aa-0.34□□□□□ -2.46
NSMCE4A-210ENST00000483541 ADAMTS12P58397 1594 aa-0.34□□□□□ -2.46
NSMCE4A-210ENST00000483541 PLIN4Q96Q06 1357 aa-0.34□□□□□ -2.46
NSMCE4A-210ENST00000483541 HYDINQ4G0P3 5121 aa-0.34□□□□□ -2.46
NSMCE4A-210ENST00000483541 HECTD1Q9ULT8 2610 aa-0.34□□□□□ -2.46
NSMCE4A-210ENST00000483541 DOPEY1Q5JWR5 2465 aa-0.35□□□□□ -2.46
NSMCE4A-210ENST00000483541 PTPN23Q9H3S7 1636 aa-0.35□□□□□ -2.46
NSMCE4A-210ENST00000483541 HERC2O95714 4834 aa-0.35□□□□□ -2.46
NSMCE4A-210ENST00000483541 EPG5Q9HCE0 2579 aa-0.35□□□□□ -2.46
NSMCE4A-210ENST00000483541 MYMXA0A1B0GTQ4 84 aa-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 H0YGG7 62 aa-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 K7EP34 96 aa-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 SNRPFP62306 86 aaKnown RBP-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 COX6B2Q6YFQ2 88 aa-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 S100A16Q96FQ6 103 aaKnown RBP-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
NSMCE4A-210ENST00000483541 PVALEFA0A1B0GWK0 134 aa-0.36□□□□□ -2.47
NSMCE4A-210ENST00000483541 WFDC9Q8NEX5 89 aa-0.36□□□□□ -2.47
NSMCE4A-210ENST00000483541 NESP48681 1621 aa-0.36□□□□□ -2.47
NSMCE4A-210ENST00000483541 UBR4Q5T4S7 5183 aa-0.36□□□□□ -2.47
NSMCE4A-210ENST00000483541 USH2AO75445 5202 aa-0.36□□□□□ -2.47
NSMCE4A-210ENST00000483541 TGP01266 2768 aa-0.37□□□□□ -2.47
NSMCE4A-210ENST00000483541 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
NSMCE4A-210ENST00000483541 DOT1LQ8TEK3 1739 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 KIAA1109Q2LD37 5005 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 FAT1Q14517 4588 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 AKAP13Q12802 2813 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 TRAV21A0A0B4J279 112 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 SPRR2AP35326 72 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 LINC00643Q86TS7 51 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 NWD1Q149M9 1564 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 LRP1BQ9NZR2 4599 aa-0.38□□□□□ -2.47
NSMCE4A-210ENST00000483541 CEBPZOSA8MTT3 80 aa-0.39□□□□□ -2.47
NSMCE4A-210ENST00000483541 NDUFB1O75438 58 aa-0.39□□□□□ -2.47
NSMCE4A-210ENST00000483541 RABAC1Q9UI14 185 aa-0.39□□□□□ -2.47
NSMCE4A-210ENST00000483541 RYR1P21817 5038 aa-0.39□□□□□ -2.47
NSMCE4A-210ENST00000483541 URB2Q14146 1524 aaKnown RBP-0.39□□□□□ -2.47
NSMCE4A-210ENST00000483541 SVEP1Q4LDE5 3571 aa-0.4□□□□□ -2.47
NSMCE4A-210ENST00000483541 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.4□□□□□ -2.47
NSMCE4A-210ENST00000483541 NDUFA3O95167 84 aa-0.4□□□□□ -2.47
NSMCE4A-210ENST00000483541 USP32Q8NFA0 1604 aa-0.4□□□□□ -2.47
NSMCE4A-210ENST00000483541 ACYP1P07311 99 aa-0.41□□□□□ -2.48
NSMCE4A-210ENST00000483541 UACAQ9BZF9 1416 aa-0.41□□□□□ -2.48
NSMCE4A-210ENST00000483541 LAMA5O15230 3695 aa-0.41□□□□□ -2.48
NSMCE4A-210ENST00000483541 PIK3C2BO00750 1634 aa-0.42□□□□□ -2.48
NSMCE4A-210ENST00000483541 ARFGEF2Q9Y6D5 1785 aa-0.42□□□□□ -2.48
NSMCE4A-210ENST00000483541 RNF213Q63HN8 5207 aa-0.42□□□□□ -2.48
NSMCE4A-210ENST00000483541 MAGI3Q5TCQ9 1506 aa-0.42□□□□□ -2.48
NSMCE4A-210ENST00000483541 MXRA5Q9NR99 2828 aa-0.42□□□□□ -2.48
NSMCE4A-210ENST00000483541 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
NSMCE4A-210ENST00000483541 HIVEP1P15822 2718 aa-0.43□□□□□ -2.48
NSMCE4A-210ENST00000483541 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
NSMCE4A-210ENST00000483541 NF1P21359 2839 aa-0.43□□□□□ -2.48
NSMCE4A-210ENST00000483541 PRRC2CQ9Y520 2896 aaKnown RBP-0.43□□□□□ -2.48
NSMCE4A-210ENST00000483541 PKHD1P08F94 4074 aa-0.43□□□□□ -2.48
NSMCE4A-210ENST00000483541 NCOA2Q15596 1464 aa-0.43□□□□□ -2.48
NSMCE4A-210ENST00000483541 SONP18583 2426 aaKnown RBP-0.44□□□□□ -2.48
NSMCE4A-210ENST00000483541 RB1CC1Q8TDY2 1594 aa-0.44□□□□□ -2.48
NSMCE4A-210ENST00000483541 KANTRA0A1W2PQU2 76 aa-0.44□□□□□ -2.48
NSMCE4A-210ENST00000483541 FLGP20930 4061 aaPredicted RBP-0.44□□□□□ -2.48
NSMCE4A-210ENST00000483541 EPPK1P58107 5090 aaKnown RBP-0.44□□□□□ -2.48
NSMCE4A-210ENST00000483541 STARD9Q9P2P6 4700 aa-0.45□□□□□ -2.48
NSMCE4A-210ENST00000483541 TNRC18O15417 2968 aaPredicted RBP-0.45□□□□□ -2.48
NSMCE4A-210ENST00000483541 KRTAP20-2Q3LI61 65 aa-0.45□□□□□ -2.48
NSMCE4A-210ENST00000483541 DDX60LQ5H9U9 1706 aaKnown RBP-0.45□□□□□ -2.48
NSMCE4A-210ENST00000483541 SCN11AQ9UI33 1791 aa-0.45□□□□□ -2.48
NSMCE4A-210ENST00000483541 PLXNC1O60486 1568 aa-0.45□□□□□ -2.48
NSMCE4A-210ENST00000483541 TEP1Q99973 2627 aaKnown RBP-0.46□□□□□ -2.48
NSMCE4A-210ENST00000483541 SPRR2EP22531 72 aa-0.46□□□□□ -2.48
NSMCE4A-210ENST00000483541 CFAP43Q8NDM7 1665 aa-0.46□□□□□ -2.48
NSMCE4A-210ENST00000483541 CCDC88BA6NC98 1476 aa-0.47□□□□□ -2.48
NSMCE4A-210ENST00000483541 C3orf79P0CE67 100 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms