RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PTPN13Q12923 2485 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 DNAJC13O75165 2243 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 CSPG4Q6UVK1 2322 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 KNDC1Q76NI1 1749 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 XRN1Q8IZH2 1706 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 SYNE2Q8WXH0 6885 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 ATP10BO94823 1461 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 TSC2P49815 1807 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 KANTRA0A1W2PQU2 76 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 CEBPZOSA8MTT3 80 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 SPRR2BP35325 72 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 LINC00643Q86TS7 51 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 ZANQ9Y493 2812 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 PIEZO2Q9H5I5 2752 aa-0.07□□□□□ -2.42
TRAPPC11-207ENST00000511409 CUX1P39880 1505 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 NF1P21359 2839 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 MAP1BP46821 2468 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 KIAA0556O60303 1618 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 FSIP2Q5CZC0 6907 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 TRAV21A0A0B4J279 112 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 H0YGG7 62 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 K7EP34 96 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 NDUFB1O75438 58 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 COX6B2Q6YFQ2 88 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 WFDC9Q8NEX5 89 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 SAMD9Q5K651 1589 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 PEG3Q9GZU2 1588 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 SLIT1O75093 1534 aa-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 EPRSP07814 1512 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 URB1O60287 2271 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 SETD2Q9BYW2 2564 aaPredicted RBP-0.08□□□□□ -2.42
TRAPPC11-207ENST00000511409 DCHS2Q6V1P9 2916 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 ABCA3Q99758 1704 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 FMN2Q9NZ56 1722 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 MACF1Q9UPN3 7388 aaKnown RBP-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 NDUFA3O95167 84 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 VWFP04275 2813 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 SCN7AQ01118 1682 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 TOPAZ1Q8N9V7 1692 aa-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
TRAPPC11-207ENST00000511409 CACNA1AO00555 2505 aa-0.1□□□□□ -2.42
TRAPPC11-207ENST00000511409 TENM2Q9NT68 2774 aa-0.1□□□□□ -2.42
TRAPPC11-207ENST00000511409 CREBBPQ92793 2442 aa-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 IFI27P40305 119 aaPredicted RBP-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 GNG2P59768 71 aa-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 LELP1Q5T871 98 aa-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 SRRM2Q9UQ35 2752 aaKnown RBP-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 LRRC37AA6NMS7 1700 aa-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 NUP188Q5SRE5 1749 aa-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 MARF1Q9Y4F3 1742 aaKnown RBP-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 FANCAO15360 1455 aa-0.1□□□□□ -2.43
TRAPPC11-207ENST00000511409 NEXMIFQ5QGS0 1516 aa-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 C3orf79P0CE67 100 aa-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 CHD1O14646 1710 aa-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 MAGI2Q86UL8 1455 aa-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 WNK1Q9H4A3 2382 aa-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 PKD1L1Q8TDX9 2849 aa-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC11-207ENST00000511409 UBR3Q6ZT12 1888 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 TARBP1Q13395 1621 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 UMAD1C9J7I0 102 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 ADIRFQ15847 76 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 S100A13Q99584 98 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 PRO3102Q9H379 93 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 ACANP16112 2415 aa-0.12□□□□□ -2.43
TRAPPC11-207ENST00000511409 PAPPA2Q9BXP8 1791 aa-0.13□□□□□ -2.43
TRAPPC11-207ENST00000511409 SHPRHQ149N8 1683 aa-0.13□□□□□ -2.43
TRAPPC11-207ENST00000511409 TDRG1Q3Y452 100 aa-0.13□□□□□ -2.43
TRAPPC11-207ENST00000511409 EP300Q09472 2414 aaPredicted RBP-0.13□□□□□ -2.43
TRAPPC11-207ENST00000511409 EPG5Q9HCE0 2579 aa-0.13□□□□□ -2.43
TRAPPC11-207ENST00000511409 CHD8Q9HCK8 2581 aa-0.13□□□□□ -2.43
TRAPPC11-207ENST00000511409 MAP1AP78559 2803 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 HMCN2Q8NDA2 5059 aa-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 ANK2Q01484 3957 aa-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 ATP7BP35670 1465 aa-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 A0A087WXM4 84 aa-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 LINC00158P58513 81 aa-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 GVINP1Q7Z2Y8 2422 aa-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 TROQ12816 1431 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 CLTCQ00610 1675 aaKnown RBP-0.14□□□□□ -2.43
TRAPPC11-207ENST00000511409 CHD6Q8TD26 2715 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 ANKRD36A6QL64 1941 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 LRRC9Q6ZRR7 1453 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 SPTA1P02549 2419 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 MON2Q7Z3U7 1717 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 HMGA1P17096 107 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 ST20Q9HBF5 79 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 TGP01266 2768 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 CEP162Q5TB80 1403 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 UACAQ9BZF9 1416 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 C5P01031 1676 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 MYH4Q9Y623 1939 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 MUC2Q02817 5179 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 PDZD2O15018 2839 aa-0.15□□□□□ -2.43
TRAPPC11-207ENST00000511409 USP9YO00507 2555 aaPredicted RBP-0.16□□□□□ -2.43
TRAPPC11-207ENST00000511409 LRRC7Q96NW7 1537 aa-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms