RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Q8BTC1 67 aa13.18□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Higd1bQ99JY6 98 aa13.18□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gm29644A0A087WPG2 191 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 SelenokQ9JLJ1 94 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gm19410A0A140LJC7 2098 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Igkv14-126A0A075B5K0 117 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Igkv6-23A0A140T8N5 115 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Tcrg-V6A0A075B5Y8 134 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gm4744D3Z3S5 154 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 P01655 112 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Psmg3Q9CZH3 122 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Spaca3Q9D9X8 221 aa13.17□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Pcp4P63054 62 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Folr2Q05685 251 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gm9944Q8C559 102 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Myo7bQ99MZ6 2113 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Phpt1Q9DAK9 124 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Znf22Q9ERU3 237 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Rs1Q9Z1L4 224 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gm37388A0A0A6YY46 143 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 NdpP48744 131 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Hist2h2beQ64524 126 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Morn2Q6UL01 79 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Tmem30bQ8BHG3 353 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Jmjd1cQ69ZK6 2350 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Tmem131O70472 1877 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Trav16d-dv11A0A075B617 117 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Thy1P01831 162 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Ms4a8Q99N10 290 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gtsf1lQ9CWD0 151 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Smlr1J3QMJ4 66 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gng7Q61016 68 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Jpt2Q6PGH2 190 aaKnown RBP13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Ormdl2Q9CQZ0 153 aa13.16□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Tmem29A2ANF5 204 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Ly6lH3BJG9 140 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Mzt1Q8BUR9 78 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Rif1Q6PR54 2419 aaKnown RBP13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Tln2Q71LX4 2375 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Gm11020F6ZGD5 61 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Neurog3P70661 214 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Rbfox3Q8BIF2 374 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Mrps11Q9DCA2 191 aaKnown RBP13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Ighv1-20A0A0A6YX66 117 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Zfp248Q640N4 576 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 PtprfA2A8L5 1898 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Igkv4-71A0A0G2JEH0 117 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Vmn1r197Q8R265 298 aa13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Mcrip2Q9CQB2 160 aaKnown RBP13.15□□□□□ -0.3
Pcdh1-203ENSMUST00000160721 Igkv4-51A0N8I8 119 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Lynx1P0DP60 116 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 GalmQ8K157 342 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Spata45Q9CVW4 97 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Slc25a15Q9WVD5 301 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 GrnP28798 589 aaKnown RBP13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Znf664Q4VA44 261 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Gm4792Q569Q2 183 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 SlaQ60898 281 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Mfap4Q9D1H9 257 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 CrygsO35486 178 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Klrd1O54707 179 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 RhogP84096 191 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Hapln4Q80WM4 400 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Olfr1402Q8VET1 320 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Trav4-4-dv10A0A075B651 110 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Spink1P09036 80 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Q80X32 188 aaKnown RBP13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Gm4894Q8CA09 118 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Atp23Q9CWQ3 201 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Trdv4Q5R1A3 115 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Saxo2Q8BQB6 394 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 MrapQ9D159 127 aa13.14□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Cox6a1P43024 111 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Jsrp1Q3MI48 332 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 SprnQ8BWU1 147 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Rnf138Q9CQE0 245 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Trav6d-3A0A075B6B3 112 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Mrps21P58059 87 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Trav6-3Q5R1E6 112 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Cd69P37217 199 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Iba57Q8CAK1 358 aaKnown RBP13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 H2al2bA9Z055 111 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Defa28D3Z1V9 94 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Defa25Q5G864 92 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Dazap2Q9DCP9 168 aa13.13□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Gm12845A0A0N4SUM5 588 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Pip4p2Q9CZX7 257 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Trav19A0A0B4J1K4 119 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Pax1P09084 446 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Ccl6P27784 116 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Defa26Q3L180 93 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Chac1Q8R3J5 223 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Edn3P48299 214 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Trav3-1Q5R1I8 114 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 GgctQ9D7X8 188 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Gm28269A0A087WSG3 125 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 P04946 108 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Zfp27P10077 819 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Spry4Q9WTP2 300 aa13.12□□□□□ -0.31
Pcdh1-203ENSMUST00000160721 Timm23Q9WTQ8 209 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms