RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Vdac2Q60930 295 aaKnown RBP9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Olfr1535Q7TQU0 326 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Trdv1A0A075B657 112 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 P01630 113 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 P01790 122 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Psg25Q497W1 475 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Mrpl36Q99N90 102 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Iah1Q9DB29 249 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gpr132Q9Z282 382 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm19410A0A140LJC7 2098 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Igkv4-91A0A075B5L2 119 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Trdv5A0A075B661 115 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 1700015F17RikD3YUK8 150 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm10521E9PZK0 135 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Olfr148Q60887 310 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 BC049762Q8C601 163 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Mrpl27Q99N92 148 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Rnf151Q9CQ29 239 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Nat6Q9R123 314 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm765B2RVL9 189 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 H1fxQ80ZM5 188 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Olfr477Q8VGI6 310 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Lce6aD3YV94 81 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Eid2bE9Q2Y0 151 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 LtbP41155 306 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Q08AU9 97 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Klk7Q91VE3 249 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 GlmpQ9JHJ3 404 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Fxyd1Q9Z239 92 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm7849D3YX03 116 aa9.54□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Trappc1Q5NCF2 145 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Obox1Q9D350 204 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Phlda3Q9WV95 125 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Zfp983E9PUT0 460 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Inafm1E9PV59 130 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 C1qtnf9Q4ZJN1 333 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Zc2hc1aQ8BJH1 324 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Fam216bQ8CC14 138 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Trav7-1A0A0G2JEV5 112 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm6904E9PVF1 202 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Igh-3P01867 404 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Pip4p1Q3TWL2 284 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Znf474Q6V5K9 347 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Tmem170aQ9D342 144 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Fam162bQ9CX19 157 aa9.53□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Olfr1012Q8VFJ7 311 aa9.52□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Cacna1iE9Q7P2 2199 aa9.52□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Zfp867E9Q2M4 473 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm2564F6Z9S8 108 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ccl19O70460 108 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Olfr1373Q7TQT6 311 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 CcsQ9WU84 274 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Trav9d-1A0A075B699 112 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Trbv13-3A0A0B4J1H2 113 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tmem200bD3Z0P8 284 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Hspe1Q64433 102 aaKnown RBP9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ang2Q64438 145 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Trav7n-4A0A075B620 113 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm15292L7N231 93 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Olfr317Q5NCD6 327 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Minos1Q7TNS2 76 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Lrrk1Q3UHC2 2014 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ighv1-67A0A0G2JFN9 117 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 TbpP29037 316 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Olfr761Q7TRJ0 323 aa9.52□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Saa4P31532 130 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Prop1P97458 223 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Chac2Q9CQG1 178 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ighv1-16A0A075B5U1 98 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ms4a12A0A087WSB9 263 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tmem95P0DJF3 176 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Col8a2P25318 699 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Olfr1380Q7TQT5 311 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Iba57Q8CAK1 358 aaKnown RBP9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Greb1Q3UHK3 1954 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Nxph4G3X9N5 304 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Defa9P50707 93 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Map6d1Q14BB9 191 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Sdr39u1Q5M8N4 308 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm15217A2CG07 155 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P01787 123 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Il19Q8CJ70 176 aa9.51□□□□□ -0.89
Pcif1-201ENSMUST00000041643 D830044I16RikA0A1D5RM53 117 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Bsph1Q3UW26 133 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Mapk1ip1lQ8BH93 242 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Derl1Q99J56 251 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Uqcrfs1Q9CR68 274 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ighv1-80A0A075B5Y3 117 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Cacng7P62956 275 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Shisal1Q0VBP7 198 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm12845A0A0N4SUM5 588 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm36368A0A1D5RLK8 91 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ang6Q5GAN0 147 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Msrb3Q8BU85 253 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Znf431E9QAG8 526 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 ApomQ9Z1R3 190 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Trav7-5A0A0G2JFX6 112 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 NdpP48744 131 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Wfdc21Q8BTE6 63 aa9.5□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Myo9bQ9QY06 2114 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 118.4 ms