RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Trav4-4-dv10A0A075B651 110 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 H2al2bA9Z055 111 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Pax1P09084 446 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Foxs1Q61574 329 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Mcrip2Q9CQB2 160 aaKnown RBP8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Gm45785A0A1B0GT05 94 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 AdmP97297 184 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 OpalinQ7M750 143 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Saxo2Q8BQB6 394 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Trav8-1A0A075B641 109 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Zfp11P10751 647 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 GalmQ8K157 342 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Ormdl2Q9CQZ0 153 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Rchy1Q9CR50 261 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Gm10306Q9CUK2 115 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Tmem92B7ZWI3 162 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Cxcl13O55038 109 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Defa-rs2P17534 91 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Q4KKZ1 196 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Olfr1381Q7TQT4 311 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Gpr82Q8BZR0 328 aa8.09□□□□□ -1.11
Syne1-201ENSMUST00000041639 Trbv31A0A075B5J5 111 aa8.09□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ighv1-67A0A0G2JFN9 117 aa8.09□□□□□ -1.12
Syne1-201ENSMUST00000041639 Foxf2O54743 446 aa8.09□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ucp1P12242 307 aa8.09□□□□□ -1.12
Syne1-201ENSMUST00000041639 Q91WE4 72 aa8.09□□□□□ -1.12
Syne1-201ENSMUST00000041639 Rnf125Q9D9R0 233 aa8.09□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ighv1-22A0A075B5U7 117 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm29289A0A087WPY7 166 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm4064A0A087WR82 380 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm10352B2RWR6 380 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Amn1B8JKV0 258 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm21693J3QK27 380 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Rbmy1a1O35698 380 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Mzt1Q8BUR9 78 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Polr3kQ9CQZ7 108 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Psmg3Q9CZH3 122 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Arfgef3Q3UGY8 2170 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Trbv12-2A0A0B4J1H1 124 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm17660B9UIU9 90 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm11020F6ZGD5 61 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Spink1P09036 80 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Jpt2Q6PGH2 190 aaKnown RBP8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Zfp420Q7TMN8 578 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Olfr1402Q8VET1 320 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 SelenokQ9JLJ1 94 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Med13lQ6JPI3 2207 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ssbp1Q9CYR0 152 aaKnown RBP8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Phpt1Q9DAK9 124 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Cited2O35740 269 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Fbxl7Q5BJ29 491 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Zfp248Q640N4 576 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Zg16Q8K0C5 167 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ms4a8Q99N10 290 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 LbhQ9CX60 105 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Trav16d-dv11A0A075B617 117 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Igkv14-130A0A0G2JF45 117 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 ChodlQ9CXM0 273 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Rs1Q9Z1L4 224 aa8.08□□□□□ -1.12
Syne1-201ENSMUST00000041639 Vopp1Q8R1C3 172 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gtsf1lQ9CWD0 151 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Sec11aQ9R0P6 179 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Igkv4-71A0A0G2JEH0 117 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Znf431E9QAG8 526 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Rnf144bQ8BKD6 301 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 P01788 123 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Jsrp1Q3MI48 332 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Hspe1Q64433 102 aaKnown RBP8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ube2cQ9D1C1 179 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 PtprfA2A8L5 1898 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm21370Q3T9V6 190 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 PifoQ9D9W1 207 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Pmaip1Q9JM54 103 aa8.07□□□□□ -1.12
Syne1-201ENSMUST00000041639 Ighv1-36A0A0A6YXT2 117 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm5819E9PZ96 154 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Defa16P50714 93 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Fbln5Q9WVH9 448 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Lgals6O54891 301 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 PigyP0C1P0 71 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Gm10803Q3TZS6 135 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Wfdc9Q3UW41 83 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Olfr1195Q8VG21 308 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Cdk2ap2Q9CPY4 127 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Tspan13Q9D8C2 204 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Klrd1O54707 179 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Zfp36P22893 319 aaKnown RBP8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Pex7P97865 318 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Slc25a15Q9WVD5 301 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Tmem8bB1AWJ5 472 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 P01724 129 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 P01727 129 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Hint1P70349 126 aaKnown RBP8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 8030423J24RikQ9CX45 142 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Rnf5O35445 180 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 P01655 112 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Pxt1Q8K459 51 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Slc25a39Q9D8K8 359 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Trav9-1A0A075B601 112 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 SbpP15501 199 aa8.06□□□□□ -1.12
Syne1-201ENSMUST00000041639 Fxyd7P59648 80 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 61.1 ms