RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Q497N7 227 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Slamf7Q8BHK6 333 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Wfdc21Q8BTE6 63 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Vmn1r216Q8R257 298 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Tmem52Q9D702 196 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Zfp53Q9Z117 652 aa10.71□□□□□ -0.69
Nup88-201ENSMUST00000035283 Ighv9-4A0A0A6YWH6 117 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Cd59aO55186 123 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Bsph1Q3UW26 133 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ang6Q5GAN0 147 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr149Q60888 311 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr877Q8VF62 311 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1012Q8VFJ7 311 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Q9CR34 168 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ammecr1Q9JHT5 344 aaKnown RBP10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Tpsg1Q9QUL7 311 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 TroQ6DIC6 2087 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 DspE9Q557 2883 aaKnown RBP10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Prrc2cQ3TLH4 2846 aaKnown RBP10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Saa4P31532 130 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 9130213A22RikQ3V3T2 120 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Neil2Q6R2P8 329 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Iba57Q8CAK1 358 aaKnown RBP10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ndfip1Q8R0W6 221 aa10.7□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trav7-1A0A0G2JEV5 112 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 G430095P16RikE9Q913 147 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Spsb3Q571F5 354 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1380Q7TQT5 311 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Scnm1Q8K136 229 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1336Q8VGH5 314 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1242Q8VGM6 306 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trav6n-6A0A075B6B2 114 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm6871L7N248 545 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm26965M0QWH4 86 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Emp2O88662 172 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 RhogP84096 191 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gata4Q08369 441 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 V1rd19Q3KNP5 305 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trappc1Q5NCF2 145 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 PgpQ8CHP8 321 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Tmem129Q8K304 362 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Lyzl1Q9CPX3 148 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Tmem126aQ9D8Y1 196 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Them7Q9DCP4 223 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Fbn2Q61555 2907 aa10.69□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trbv14A0A140T8L9 115 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Plcxd2B2RXA1 340 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Fabp6P51162 128 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Tmem241Q3UME2 297 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 C1qtnf4Q8R066 326 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Chac2Q9CQG1 178 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Necap2Q9D1J1 266 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Cnot1Q6ZQ08 2375 aaKnown RBP10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trav14d-1A0A075B6B1 121 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm3512L7N206 146 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 P01649 108 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 CebpdQ00322 268 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr823Q7TRH2 315 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Igfbpl1Q80W15 270 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Sox21Q811W0 276 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1199Q8VF94 310 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr824Q8VFU4 315 aa10.68□□□□□ -0.7
Nup88-201ENSMUST00000035283 Prb1Q91X93 504 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Tmem189Q99LQ7 271 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Q9DAZ5 108 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ly6g6dQ9Z1Q3 135 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Arf6P62331 175 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr745Q7TRL9 328 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1367Q8VFG2 316 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ccl8Q9Z121 97 aa10.67□□□□□ -0.7
Nup88-201ENSMUST00000035283 Rnf212bD3Z423 297 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Defa35E9QLQ1 93 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Vmn1r60G3UY47 300 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ca1P13634 261 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Obox7Q4KL20 218 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr150Q60895 312 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Dppa2Q9CWH0 301 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Abca7Q91V24 2159 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trav9d-1A0A075B699 112 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ighv8-4A0A0A6YW26 117 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr1337A2ACY8 315 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm6096D3YTY6 151 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm26727M0QWT1 121 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Rpp30O88796 268 aaKnown RBP10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Saa3P04918 122 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm1968Q3T9I3 115 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Olfr761Q7TRJ0 323 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Card19Q9D1I2 183 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Lyg1Q9D7Q0 197 aa10.66□□□□□ -0.7
Nup88-201ENSMUST00000035283 Trank1Q8BV79 2999 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ighv7-3A0A075B5R2 120 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ceacam15A0A0B4J1L0 234 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm45623A0A1B0GSF6 103 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Gm15056F6ZR08 88 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ifi27Q8C6G0 260 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ccl3P10855 92 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Defa6P50704 93 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Dlx6P70397 175 aa10.65□□□□□ -0.7
Nup88-201ENSMUST00000035283 Ighv7-4A0A0A6YXL5 121 aa10.64□□□□□ -0.71
Nup88-201ENSMUST00000035283 BC107364E9Q5A2 140 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms