Protein–RNA interactions for Protein: Q8R066

C1qtnf4, Complement C1q tumor necrosis factor-related protein 4, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1qtnf4Q8R066 Gm25239-201ENSMUST00000174915 86 ntBASIC32.14■■■□□ 2.74
C1qtnf4Q8R066 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
C1qtnf4Q8R066 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
C1qtnf4Q8R066 Gm15042-201ENSMUST00000120212 883 ntBASIC28.29■■■□□ 2.12
C1qtnf4Q8R066 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
C1qtnf4Q8R066 Gm24109-201ENSMUST00000175489 103 ntBASIC27.74■■■□□ 2.03
C1qtnf4Q8R066 Gm15045-201ENSMUST00000117359 883 ntBASIC27.61■■■□□ 2.01
C1qtnf4Q8R066 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
C1qtnf4Q8R066 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
C1qtnf4Q8R066 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
C1qtnf4Q8R066 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
C1qtnf4Q8R066 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
C1qtnf4Q8R066 Gm23366-201ENSMUST00000175022 89 ntBASIC26.95■■□□□ 1.9
C1qtnf4Q8R066 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
C1qtnf4Q8R066 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
C1qtnf4Q8R066 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
C1qtnf4Q8R066 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.34■■□□□ 1.81
C1qtnf4Q8R066 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
C1qtnf4Q8R066 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
C1qtnf4Q8R066 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
C1qtnf4Q8R066 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
C1qtnf4Q8R066 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
C1qtnf4Q8R066 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.9■■□□□ 1.74
C1qtnf4Q8R066 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
C1qtnf4Q8R066 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
C1qtnf4Q8R066 Psd-208ENSMUST00000224556 2034 ntBASIC25.83■■□□□ 1.73
C1qtnf4Q8R066 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
C1qtnf4Q8R066 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.77■■□□□ 1.72
C1qtnf4Q8R066 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.66■■□□□ 1.7
C1qtnf4Q8R066 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
C1qtnf4Q8R066 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
C1qtnf4Q8R066 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
C1qtnf4Q8R066 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
C1qtnf4Q8R066 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
C1qtnf4Q8R066 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.4■■□□□ 1.66
C1qtnf4Q8R066 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.37■■□□□ 1.65
C1qtnf4Q8R066 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
C1qtnf4Q8R066 Gm25238-201ENSMUST00000174914 89 ntBASIC25.28■■□□□ 1.64
C1qtnf4Q8R066 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
C1qtnf4Q8R066 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
C1qtnf4Q8R066 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
C1qtnf4Q8R066 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
C1qtnf4Q8R066 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.98■■□□□ 1.59
C1qtnf4Q8R066 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
C1qtnf4Q8R066 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.86■■□□□ 1.57
C1qtnf4Q8R066 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
C1qtnf4Q8R066 Gm27325-201ENSMUST00000175467 74 ntBASIC24.79■■□□□ 1.56
C1qtnf4Q8R066 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
C1qtnf4Q8R066 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
C1qtnf4Q8R066 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
C1qtnf4Q8R066 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.68■■□□□ 1.54
C1qtnf4Q8R066 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
C1qtnf4Q8R066 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.58■■□□□ 1.53
C1qtnf4Q8R066 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.57■■□□□ 1.52
C1qtnf4Q8R066 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
C1qtnf4Q8R066 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.53■■□□□ 1.52
C1qtnf4Q8R066 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
C1qtnf4Q8R066 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
C1qtnf4Q8R066 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
C1qtnf4Q8R066 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
C1qtnf4Q8R066 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C1qtnf4Q8R066 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C1qtnf4Q8R066 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C1qtnf4Q8R066 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
C1qtnf4Q8R066 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.3■■□□□ 1.48
C1qtnf4Q8R066 Rab21-202ENSMUST00000218831 843 ntBASIC24.3■■□□□ 1.48
C1qtnf4Q8R066 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
C1qtnf4Q8R066 Gm25262-201ENSMUST00000174934 133 ntBASIC24.27■■□□□ 1.48
C1qtnf4Q8R066 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
C1qtnf4Q8R066 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
C1qtnf4Q8R066 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
C1qtnf4Q8R066 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.2■■□□□ 1.46
C1qtnf4Q8R066 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
C1qtnf4Q8R066 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
C1qtnf4Q8R066 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
C1qtnf4Q8R066 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.12■■□□□ 1.45
C1qtnf4Q8R066 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
C1qtnf4Q8R066 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
C1qtnf4Q8R066 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
C1qtnf4Q8R066 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24■■□□□ 1.43
C1qtnf4Q8R066 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
C1qtnf4Q8R066 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.91■■□□□ 1.42
C1qtnf4Q8R066 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
C1qtnf4Q8R066 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
C1qtnf4Q8R066 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.87■■□□□ 1.41
C1qtnf4Q8R066 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
C1qtnf4Q8R066 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
C1qtnf4Q8R066 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
C1qtnf4Q8R066 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.8■■□□□ 1.4
C1qtnf4Q8R066 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.79■■□□□ 1.4
C1qtnf4Q8R066 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.76■■□□□ 1.39
C1qtnf4Q8R066 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
C1qtnf4Q8R066 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
C1qtnf4Q8R066 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
C1qtnf4Q8R066 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.7■■□□□ 1.38
C1qtnf4Q8R066 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
C1qtnf4Q8R066 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
C1qtnf4Q8R066 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
C1qtnf4Q8R066 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
C1qtnf4Q8R066 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms