RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Col9a3A2ACT7 680 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Dkk1O54908 272 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 PolP10400 120 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tcf24V9GWT9 166 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Prr19B2RW88 366 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Hils1Q9QYL0 170 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Bcorl1A2AQH4 1781 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tmem141A2AJB2 108 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tcrg-C3L7N479 172 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 P01736 120 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 P03985 172 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Rpl32-psP17932 135 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Nhlrc3Q8CCH2 347 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Trav7-2Q5R1I3 112 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 CckP09240 115 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 NdpP48744 131 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Sh2d6Q9D413 297 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Znf385cA2A5E6 429 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Q8R092 253 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Sfxn3Q91V61 321 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ndufa3Q9CQ91 84 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Carhsp1Q9CR86 148 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Plpp2Q9DAX2 276 aa11.65□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Luzp4B1AV09 449 aa11.65□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm15127B1AVZ5 449 aa11.65□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm15107B1B0X0 449 aa11.65□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Klf14Q19A41 325 aa11.65□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Trav2Q5R1I9 109 aa11.65□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm15085Q62012 449 aa11.65□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Efnb3O35393 340 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Il12rb1Q60837 738 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Psg25Q497W1 475 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Fblim1Q71FD7 375 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 MplkipQ9D011 178 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Mrpl14Q9D1I6 145 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Igkv3-2A0A075B5P0 119 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 C2cd4dP0CG09 341 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 2200002J24RikQ9D807 110 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 1700025B11RikA0A087WNZ6 93 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Eif4ebp2P70445 120 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ndufb8Q9D6J5 186 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Pradc1Q9D9N8 188 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Hbb-bsA8DUK4 147 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Hbb-b1P02088 147 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 LtaP09225 202 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Nlrc5C3VPR6 1915 aa11.64□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Tmem258P61166 79 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 8030423J24RikQ9CX45 142 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Susd3Q9D176 269 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Efna2P52801 209 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 SpinklQ8CEK3 90 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Socs3O35718 225 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Trav4-4-dv10A0A075B651 110 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ighv1-49A0A0A6YWX2 117 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ighv9-3A0A0B4J1J5 117 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Tmem167aQ9CR64 72 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Prss8Q9ESD1 342 aa11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Zdbf2Q5SS00 2493 aaKnown RBP11.63□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm12169F2Z474 250 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 P01783 136 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 C1ql2Q8CFR0 287 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 PpyP10601 100 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm94Q3V2D2 93 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 YrdcQ3U5F4 280 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Lyzl4Q9D925 145 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 SvipQ3UZP4 77 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Smad7O35253 426 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Cdcp2Q8BQH6 427 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Shisa9Q9CZN4 424 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 C2cd3Q52KB6 2323 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm2174F6ZVF2 133 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 P01811 117 aa11.62□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Igkv1-99F6XWB2 120 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Cd200r5Q8BTP3 270 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Obox1Q9D350 204 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm21974F6W3F3 119 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gtf3aQ8VHT7 364 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ncoa6Q9JL19 2067 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm10428J3QNV7 132 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Nr2c2apQ3TV70 140 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Immp1lQ9CQU8 166 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Jpt2Q6PGH2 190 aaKnown RBP11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Mrps36Q9CQX8 102 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 P18526 117 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Mrpl16Q99N93 251 aa11.61□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Atp6v0bQ91V37 205 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ubl5Q9EPV8 73 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Tanc2A2A690 1994 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Amn1B8JKV0 258 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 eef1akmt3D3YWP0 232 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Igkv8-24A0A140T8P5 121 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 PspnO70300 156 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Cend1Q9JKC6 149 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Trbv31A0A075B5J5 111 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Vdac2Q60930 295 aaKnown RBP11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm9747Q810H1 104 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Igkv4-72A0A0B4J1I4 117 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Inafm2A0A1L1STD6 152 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gm27021M0QWE2 156 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Eml5Q8BQM8 1977 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms