RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ints1Q6P4S8 2195 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ighv1-36A0A0A6YXT2 117 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Snrnp40Q6PE01 358 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Q8BG31 207 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Slc17a9Q8VCL5 447 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Olfr1323Q8VF35 309 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Tmem167aQ9CR64 72 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Slc25a39Q9D8K8 359 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Bcorl1A2AQH4 1781 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Colca2F8VPY8 239 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Fgf4P11403 202 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ube2d2bQ6ZWY6 147 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 TcraP01849 138 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Spsb3Q571F5 354 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Cdkn2aQ64364 169 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ssbp1Q9CYR0 152 aaKnown RBP12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Slamf6Q9ET39 351 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Col11a1Q61245 1804 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm10881P01642 115 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Cdkn1aP39689 159 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Loxl2P58022 776 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Mrps21P58059 87 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Msrb2Q78J03 175 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Olfr1381Q7TQT4 311 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Cpsf4lE9Q2N0 280 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Q9D727 114 aa12.78□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 4930583I09RikQ9D2E3 102 aa12.77□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm17660B9UIU9 90 aa12.77□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Thy1P01831 162 aa12.77□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 4931428L18RikQ9D4S9 127 aa12.77□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Cend1Q9JKC6 149 aa12.77□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Tmem92B7ZWI3 162 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Cxcl13O55038 109 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Tm2d3Q8BJ83 261 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Ube2cQ9D1C1 179 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Zfhx2Q2MHN3 2562 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Bdp1Q571C7 2467 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 G6pc2Q9Z186 355 aa12.77□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Zfp36P22893 319 aaKnown RBP12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Reg1P43137 165 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Gm16503Q8C6M9 103 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Slc25a15Q9WVD5 301 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Ighv1-22A0A075B5U7 117 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Pxt1Q8K459 51 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Egr1P08046 533 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Pgpep1lQ9CWB5 130 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 ElnP54320 860 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Olfr975Q8VG91 310 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Lyzl1Q9CPX3 148 aa12.76□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Plpp2Q9DAX2 276 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Plekhb2Q9QZC7 221 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 A0A1Y7VMQ4 148 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Gm35549A0A0N4SUS7 141 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Defa-rs7P50715 91 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Col4a5Q63ZW6 1691 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 P01660 111 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 P04946 108 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 C330021F23RikQ8C7T0 141 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Zg16Q8K0C5 167 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Pth2Q91W27 100 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 LctF8VPT3 1931 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 A0A1Y7VLU2 103 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Nhlrc1Q8BR37 401 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Prss58Q8BW11 241 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Vmn1r197Q8R265 298 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Polr3kQ9CQZ7 108 aa12.75□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Smlr1J3QMJ4 66 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Pex7P97865 318 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Olfr1367Q8VFG2 316 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Zcchc24B2RVL6 241 aaKnown RBP12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Mllt11P97783 90 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Olfr976Q8VF15 326 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Igkv14-130A0A0G2JF45 117 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Bak1O08734 209 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Rnf138Q9CQE0 245 aaKnown RBP12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Defb3Q9WTL0 63 aa12.74□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Il1f10Q8R459 152 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Olfr984Q8VFN1 314 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Gdf15Q9Z0J7 303 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Olfr748E9Q9Z0 307 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Gm10306Q9CUK2 115 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Igkv6-23A0A140T8N5 115 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Saa4P31532 130 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Gtsf1lQ9CWD0 151 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Spaca3Q9D9X8 221 aa12.73□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 ElaneQ3UP87 265 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Zfp119aQ9JIC0 545 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Hist2h2beQ64524 126 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Ighv1-18A0A0A6YXN4 117 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 P01726 129 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 TtrP07309 147 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Cxcl14Q9WUQ5 99 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Itgb1bp1O35671 200 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Cox8bP48772 70 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Gm10447Q3UQ92 135 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Cmc4Q61908 68 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 OtorQ9JIE3 128 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 HilpdaQ9JLS0 64 aa12.72□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Itgb4A2A863 1818 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Ighv1-34A0A075B5V2 117 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms