RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Plxnb3Q9QY40 1902 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Trav4-4-dv10A0A075B651 110 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm12830F6XVH0 157 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Slc25a47Q6IS41 310 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Sox21Q811W0 276 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 ArtnQ9Z0L2 224 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm37388A0A0A6YY46 143 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm10803Q3TZS6 135 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 AgaQ64191 346 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ovol2Q8CIV7 274 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Rnf212F6TQD1 307 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Dennd4cA6H8H2 1906 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm21616B6ZB74 166 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 TcraP01849 138 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Defb30Q30KN4 75 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Igkv4-90A0A075B5L3 117 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ighv1-34A0A075B5V2 117 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ms4a12A0A087WSB9 263 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 IappP12968 93 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm9944Q8C559 102 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ighv1-67A0A0G2JFN9 117 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Olfr779E9PUS9 130 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Cox6a1P43024 111 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Spsb3Q571F5 354 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Rnf144bQ8BKD6 301 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 5930422O12RikQ8C4Y4 123 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 QrfpQ8CE23 124 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tomm7Q9D173 55 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 GrnP28798 589 aaKnown RBP9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm5148Q8BGG2 154 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Pcnx1Q9QYC1 2344 aa9.07□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Trav7n-4A0A075B620 113 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Igh-3P01867 404 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Megf10Q6DIB5 1147 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Q8BTC1 67 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Obox1Q9D350 204 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm12845A0A0N4SUM5 588 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Znrd1Q791N7 123 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Wnt2P21552 360 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 MymxQ2Q5T5 84 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 AdipoqQ60994 247 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Znf329Q6GQR8 522 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Nrn1Q8CFV4 142 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Prss29Q99MS4 279 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm10306Q9CUK2 115 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tmem52Q9D702 196 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Trav9-1A0A075B601 112 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Mmp23O88676 391 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Olfr317Q5NCD6 327 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm5868Q8BJG1 145 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 GalmQ8K157 342 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tmem167aQ9CR64 72 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Crybb3Q9JJU9 211 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Hoxa5P09021 270 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Pax1P09084 446 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Defa-rs7P50715 91 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Q4KKZ1 196 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Stpg1Q9D2F5 341 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Erg28Q9ERY9 140 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Fbln5Q9WVH9 448 aa9.06□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Klf12O35738 402 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tmem170aQ9D342 144 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Cnn3Q9DAW9 330 aaKnown RBP9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 S100a8P27005 89 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Wdr83osQ6ZWX0 106 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 LgalslbQ7TPX9 165 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 OstcQ78XF5 149 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Pmaip1Q9JM54 103 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Psmg4P0C7N9 123 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Cphx2Q8BX39 182 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Akap6E9Q9K8 2307 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Rnf5O35445 180 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Sdr39u1Q5M8N4 308 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Fam19a2Q7TPG7 131 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Hapln4Q80WM4 400 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm4763Q8CFJ5 196 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Klk7Q91VE3 249 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Fgf16Q9ESL8 207 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm45521A0A1B0GRK0 198 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 P01724 129 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 P01727 129 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Svs5P30933 122 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 C330021F23RikQ8C7T0 141 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Olfr523Q8VFE7 317 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Slc25a39Q9D8K8 359 aa9.05□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ighv5-6A0A075B5Q0 117 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Scgb1b11A0A087WQJ0 93 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Cacng7P62956 275 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Jsrp1Q3MI48 332 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Timm21Q8CCM6 249 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Immp1lQ9CQU8 166 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Atxn7l1Q9CZ05 146 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Plxnb1Q8CJH3 2119 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Vdac2Q60930 295 aaKnown RBP9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 1700001C19RikQ8K168 210 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Sap30O88574 220 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tmem136Q3TYE7 245 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm20854Q62461 227 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 SprnQ8BWU1 147 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Col5a3Q9JLI2 1739 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms