RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Necap2Q9D1J1 266 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Zfp109A0A0U1RPC5 652 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Vma21-psA0A140T8R2 101 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 P18526 117 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Dnajc30P59041 219 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Slamf7Q8BHK6 333 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Rnase2aQ8K196 155 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Ccl8Q9Z121 97 aa11.98□□□□□ -0.49
Nup54-201ENSMUST00000038514 Scgb1b19F6WYW0 93 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 AY761185Q5ERI8 94 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Leprotl1Q9CQ74 131 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Olfr19Q9JHB2 309 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Lamtor2Q9JHS3 125 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 F5O88783 2183 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Olfr364-ps1A0A140T8Q2 307 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Zfp114B2RRA8 586 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Trav6-2Q5R1I4 113 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Tmem177Q8BPE4 311 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Tmem129Q8K304 362 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 4930412O13RikQ9D5M9 106 aa11.97□□□□□ -0.49
Nup54-201ENSMUST00000038514 Trav14-3A0A075B607 120 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 eef1akmt3D3YWP0 232 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 Crip1P63254 77 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 Lrfn3Q8BLY3 626 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 PgpQ8CHP8 321 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 Klf13Q9JJZ6 289 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 Psmb2Q9R1P3 201 aa11.96□□□□□ -0.49
Nup54-201ENSMUST00000038514 Shank1D3YZU1 2167 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gm28778A0A087WSK7 233 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cldn1O88551 211 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 NpyP57774 97 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Plp1P60202 277 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Olfr745Q7TRL9 328 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Rnd1Q8BLR7 232 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Olfr958Q8VEY3 312 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 Golt1bQ9CR60 138 aa11.96□□□□□ -0.5
Nup54-201ENSMUST00000038514 CadB2RQC6 2225 aa11.95□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cd59aO55186 123 aa11.95□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gm9949Q8C9F4 104 aa11.95□□□□□ -0.5
Nup54-201ENSMUST00000038514 OtosQ8R448 89 aa11.95□□□□□ -0.5
Nup54-201ENSMUST00000038514 Fam213bQ9DB60 201 aa11.95□□□□□ -0.5
Nup54-201ENSMUST00000038514 Them7Q9DCP4 223 aa11.95□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gm20458E9PXJ7 78 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Q9CQM1 111 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Q9CR34 168 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ube2v1Q9CZY3 147 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Rnase4Q9JJH1 148 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Arhgef17Q80U35 2057 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 DysfQ9ESD7 2090 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Nat8f4G5E8L3 226 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ttc9cQ810A3 171 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Eda2rQ8BX35 297 aa11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 SpenQ62504 3644 aaKnown RBP11.94□□□□□ -0.5
Nup54-201ENSMUST00000038514 Igkv1-133A0A0B4J1H8 120 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Saa4P31532 130 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cphx2Q8BX39 182 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 C1qtnf5Q8K479 243 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Olfr211Q8VGH2 309 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Fabp6P51162 128 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 HrkP62816 92 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ndfip1Q8R0W6 221 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Olfr1242Q8VGM6 306 aa11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Dazap1Q9JII5 406 aaKnown RBP11.93□□□□□ -0.5
Nup54-201ENSMUST00000038514 Olfr1337A2ACY8 315 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cxcl13O55038 109 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Neil2Q6R2P8 329 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Chac2Q9CQG1 178 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Pcnx1Q9QYC1 2344 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Col6a6Q8C6K9 2265 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ighv1-62-2A0A0A6YXZ4 119 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Trav7-1A0A0G2JEV5 112 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Rpp30O88796 268 aaKnown RBP11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gpm6bP35803 328 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Spsb3Q571F5 354 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cox7a2lQ61387 111 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Zfp92Q62396 488 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Olfr1434Q7TQR9 312 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gm9958Q8C9U4 106 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Zfp53Q9Z117 652 aa11.92□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ighv5-9A0A075B5Q2 117 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Trav9-1A0A075B601 112 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Trav23A0A0G2JG17 115 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Vmn1r1E9PVR6 306 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Rnf5O35445 180 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 P0C1Z5 52 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 HeylQ9DBX7 326 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ahctf1Q8CJF7 2243 aaKnown RBP11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Rnf212bD3Z423 297 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Q497N7 227 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Plxdc1Q91ZV7 500 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Mrpl32Q9DCI9 187 aaKnown RBP11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Icam4Q9ERM2 262 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cend1Q9JKC6 149 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Trappc2lQ9JME7 139 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Ovol1Q9WTJ2 267 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Osr1Q9WVG7 266 aa11.91□□□□□ -0.5
Nup54-201ENSMUST00000038514 Trav6-6A0A075B603 114 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Trav14d-1A0A075B6B1 121 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Platr25A0A1Y7VIZ1 466 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 TfpiO54819 306 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms