RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Tcl1b2P56841 117 aa12.56□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Znf146Q8BQN6 292 aa12.56□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Trdv1A0A075B657 112 aa12.56□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Trav21-dv12A0A075B6C4 109 aa12.56□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Gm4792Q569Q2 183 aa12.56□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Mrpl36Q99N90 102 aa12.56□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Tmem88bQ3TYP4 173 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Cdkn2aQ64364 169 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Olfr1402Q8VET1 320 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Olfr1323Q8VF35 309 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Susd3Q9D176 269 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 eef1akmt3D3YWP0 232 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Ss18Q62280 418 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Iba57Q8CAK1 358 aaKnown RBP12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 TirapQ99JY1 241 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Zfp236S4R299 1847 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Dock3Q8CIQ7 2027 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Cks1bP61025 79 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Slc25a39Q9D8K8 359 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Phpt1Q9DAK9 124 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Akap6E9Q9K8 2307 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Igkv4-51A0N8I8 119 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Cox8bP48772 70 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Rnf115Q9D0C1 305 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Ccpg1osV9GXK1 122 aa12.55□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Gtsf1lQ9CWD0 151 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Hils1Q9QYL0 170 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 YrdcQ3U5F4 280 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Foxs1Q61574 329 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Olfr984Q8VFN1 314 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 AgerQ62151 402 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Dmrtc2Q8CGW9 370 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Klk7Q91VE3 249 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Gm10306Q9CUK2 115 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 SlpiP97430 131 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Znhit3Q9CQK1 151 aa12.54□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Col11a1Q61245 1804 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Trav8-1A0A075B641 109 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Foxf2O54743 446 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Ca2P00920 260 aaKnown RBP12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Cox7a2lQ61387 111 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Gpr82Q8BZR0 328 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Mrpl16Q99N93 251 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Defb3Q9WTL0 63 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Sbf2E9PXF8 1872 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Atg2bQ80XK6 2075 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Mllt11P97783 90 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Sp9Q64HY3 484 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Prss41Q920S2 322 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Slc25a15Q9WVD5 301 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 1500009C09RikD3YYW9 81 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Vopp1Q8R1C3 172 aa12.53□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Ighv1-36A0A0A6YXT2 117 aa12.52□□□□□ -0.4
Col2a1-201ENSMUST00000023123 PigyP0C1P0 71 aa12.52□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Rbfox3Q8BIF2 374 aa12.52□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Tspan13Q9D8C2 204 aa12.52□□□□□ -0.4
Col2a1-201ENSMUST00000023123 Lypd1Q8BLC3 141 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 NracQ8BNX7 165 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Abca1P41233 2261 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Tmem141A2AJB2 108 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 4931428L18RikQ9D4S9 127 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 OtofQ9ESF1 1997 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Heatr1G3X9B1 2143 aaKnown RBP12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Repin1Q5U4E2 545 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Foxg1Q60987 481 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Tex48Q9DA81 110 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 OtorQ9JIE3 128 aa12.52□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Zfp420Q7TMN8 578 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Slc17a9Q8VCL5 447 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Rnf125Q9D9R0 233 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Ralgapa2A3KGS3 1872 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Trbv13-3A0A0B4J1H2 113 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Dmrt3Q80WT2 476 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 C730034F03RikQ8BGL5 111 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Mapk1ip1Q9D7G9 263 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Ighv1-37A0A0A6YW32 117 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 RhogP84096 191 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 AdmP97297 184 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Gm21370Q3T9V6 190 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Defa-rs2P17534 91 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 9430097D07RikQ8BS47 195 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Dock1Q8BUR4 1865 aa12.51□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Cep250Q60952 2414 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 A0A1Y7VLU2 103 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Tmem238A9JSM3 176 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Ly6lH3BJG9 140 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Thy1P01831 162 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Srsf6Q3TWW8 339 aaKnown RBP12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Gm9944Q8C559 102 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Ighv1-7A0A075B5T7 117 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 PspnO70300 156 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Zcwpw2Q08EN7 125 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 AY761184Q9D848 116 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Col4a5Q63ZW6 1691 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Gm29289A0A087WPY7 166 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Gm4064A0A087WR82 380 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Gm10352B2RWR6 380 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Gm21693J3QK27 380 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Rbmy1a1O35698 380 aa12.5□□□□□ -0.41
Col2a1-201ENSMUST00000023123 Defa7P50705 93 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 153.2 ms