RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MXRA5Q9NR99 2828 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 IGHV3-64A0A075B6Q5 118 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 LYRM9A8MSI8 78 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 LY6G6DO95868 133 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 MT-ATP8P03928 68 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 XGP55808 180 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 NTM-AS1Q6ZSK4 140 aa5.9□□□□□ -1.46
SPG11-209ENST00000558253 APCP25054 2843 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 TRBV6-8A0A0A6YYG3 113 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 LINC00694P0DN24 101 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 APOC4P55056 127 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
SPG11-209ENST00000558253 FHL2Q14192 279 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 Q1RN00 199 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 HIST2H2BCQ6DN03 193 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 LINC01561Q8N1V8 128 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
SPG11-209ENST00000558253 FAM240AA0A1B0GVK7 77 aa5.88□□□□□ -1.47
SPG11-209ENST00000558253 SMIM1B2RUZ4 78 aa5.88□□□□□ -1.47
SPG11-209ENST00000558253 TCL1BO95988 128 aa5.88□□□□□ -1.47
SPG11-209ENST00000558253 RPL13AP40429 203 aaKnown RBP5.88□□□□□ -1.47
SPG11-209ENST00000558253 RNASE13Q5GAN3 156 aaKnown RBP5.88□□□□□ -1.47
SPG11-209ENST00000558253 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
SPG11-209ENST00000558253 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
SPG11-209ENST00000558253 POLQO75417 2590 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 TRAV13-1A0A0B4J241 112 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 A0A1B0GUV1 79 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 B5MCH6 92 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 F5H768 121 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 ATP5G1P05496 136 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
SPG11-209ENST00000558253 IMUPQ9GZP8 106 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 Q9H8V8 135 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 PRO0255Q9UI72 69 aa5.87□□□□□ -1.47
SPG11-209ENST00000558253 ZANQ9Y493 2812 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 COX6A2Q02221 97 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 ADAMTSL4-AS1Q5T5F5 129 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 PRIMA1Q86XR5 153 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 LINC00308Q8TCZ7 52 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 CARD19Q96LW7 228 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 ICOSQ9Y6W8 199 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 MAP1AP78559 2803 aaPredicted RBP5.86□□□□□ -1.47
SPG11-209ENST00000558253 ZFYVE26Q68DK2 2539 aa5.86□□□□□ -1.47
SPG11-209ENST00000558253 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 H3BT86 120 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 SLC25A20O43772 301 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 CRLF1O75462 422 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 ACYP1P07311 99 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 KRTAP10-3P60369 221 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 LINC01620Q4KN68 170 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 FAM222AQ5U5X8 452 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 HIST2H2BDQ6DRA6 164 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.85□□□□□ -1.47
SPG11-209ENST00000558253 CHCHD5Q9BSY4 110 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 NACAE9PAV3 2078 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 CENPEQ02224 2701 aa5.85□□□□□ -1.47
SPG11-209ENST00000558253 SORL1Q92673 2214 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 ITPR3Q14573 2671 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 SVEP1Q4LDE5 3571 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 A0A087WZ39 114 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 TRAV8-4A0A0B4J246 113 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 IBA57-AS1B1ANH7 110 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 MIFP14174 115 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 SS18Q15532 418 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 MEIG1Q5JSS6 88 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 WFDC9Q8NEX5 89 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 COX7B2Q8TF08 81 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 WFDC10AQ9H1F0 79 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 X6R8D5 127 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 ABCA12Q86UK0 2595 aa5.84□□□□□ -1.47
SPG11-209ENST00000558253 VPS13CQ709C8 3753 aa5.84□□□□□ -1.48
SPG11-209ENST00000558253 IGHV3OR16-9A0A0B4J2B5 98 aa5.83□□□□□ -1.48
SPG11-209ENST00000558253 C9JAW5 83 aa5.83□□□□□ -1.48
SPG11-209ENST00000558253 TRIAP1O43715 76 aa5.83□□□□□ -1.48
SPG11-209ENST00000558253 NHLRC4P0CG21 123 aaPredicted RBP5.83□□□□□ -1.48
SPG11-209ENST00000558253 GYPEP15421 78 aa5.83□□□□□ -1.48
SPG11-209ENST00000558253 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
SPG11-209ENST00000558253 PDZD2O15018 2839 aa5.83□□□□□ -1.48
SPG11-209ENST00000558253 H7C2G1 150 aa5.82□□□□□ -1.48
SPG11-209ENST00000558253 DEFB130BP0DP73 79 aa5.82□□□□□ -1.48
SPG11-209ENST00000558253 DEFB130AP0DP74 79 aa5.82□□□□□ -1.48
SPG11-209ENST00000558253 MUC7Q8TAX7 377 aa5.82□□□□□ -1.48
SPG11-209ENST00000558253 TRBV7-7A0A0K0K1E9 115 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 LOC100131303A0A0U1RQF7 123 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 LINC00959A0A1B0GUT2 108 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 A8MZ25 164 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 INAFM1C9JVW0 142 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 LST1O00453 97 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 CXCL5P42830 114 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 SMIM20Q8N5G0 67 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 SMR3AQ99954 134 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 EPG5Q9HCE0 2579 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 MYO9AB2RTY4 2548 aa5.81□□□□□ -1.48
SPG11-209ENST00000558253 A0A1B0GX51 115 aa5.8□□□□□ -1.48
SPG11-209ENST00000558253 COX7A2LO14548 114 aa5.8□□□□□ -1.48
SPG11-209ENST00000558253 TRACP01848 142 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms