RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 NCR3O14931 201 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 KRTAP10-9P60411 292 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 ETDCA0A1B0GVM5 59 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 H0YGX0 51 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 LINC00269Q8N2A0 174 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 TACC2O95359 2948 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 ODF3Q96PU9 254 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 ZNF702PQ9H963 129 aa7.99□□□□□ -1.13
PCDHGA1-202ENST00000517417 NDUFA1O15239 70 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 TRIAP1O43715 76 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 RBMY1FQ15415 496 aaKnown RBP7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 LINC01006Q8NI28 216 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 COL12A1Q99715 3063 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 IGHV4-28A0A0C4DH34 117 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 TRBV6-5A0A0K0K1A5 114 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 KLLNB2CW77 178 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 CRYGDP07320 174 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
PCDHGA1-202ENST00000517417 EDN2P20800 178 aa7.97□□□□□ -1.13
PCDHGA1-202ENST00000517417 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
PCDHGA1-202ENST00000517417 H3BT86 120 aa7.97□□□□□ -1.13
PCDHGA1-202ENST00000517417 TSHBP01222 138 aa7.96□□□□□ -1.13
PCDHGA1-202ENST00000517417 CRIP2P52943 208 aaPredicted RBP7.96□□□□□ -1.13
PCDHGA1-202ENST00000517417 MIAQ16674 131 aa7.96□□□□□ -1.13
PCDHGA1-202ENST00000517417 HIGD2BQ4VC39 106 aa7.96□□□□□ -1.13
PCDHGA1-202ENST00000517417 FAM110AQ9BQ89 295 aa7.96□□□□□ -1.13
PCDHGA1-202ENST00000517417 IGKV3D-7A0A0C4DH55 119 aa7.96□□□□□ -1.14
PCDHGA1-202ENST00000517417 A8MZ25 164 aa7.96□□□□□ -1.14
PCDHGA1-202ENST00000517417 HECTD1Q9ULT8 2610 aa7.96□□□□□ -1.14
PCDHGA1-202ENST00000517417 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
PCDHGA1-202ENST00000517417 TRACP01848 142 aa7.95□□□□□ -1.14
PCDHGA1-202ENST00000517417 TRBV30A0A0K0K1B3 111 aa7.95□□□□□ -1.14
PCDHGA1-202ENST00000517417 DCANP1Q8TF63 244 aa7.94□□□□□ -1.14
PCDHGA1-202ENST00000517417 LY6G6DO95868 133 aa7.94□□□□□ -1.14
PCDHGA1-202ENST00000517417 REG3AQ06141 175 aa7.94□□□□□ -1.14
PCDHGA1-202ENST00000517417 C11orf45Q8TAV5 145 aa7.94□□□□□ -1.14
PCDHGA1-202ENST00000517417 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
PCDHGA1-202ENST00000517417 SMR3AQ99954 134 aa7.94□□□□□ -1.14
PCDHGA1-202ENST00000517417 TIRAPP58753 221 aa7.93□□□□□ -1.14
PCDHGA1-202ENST00000517417 BBC3Q96PG8 261 aaPredicted RBP7.93□□□□□ -1.14
PCDHGA1-202ENST00000517417 ATRQ13535 2644 aa7.93□□□□□ -1.14
PCDHGA1-202ENST00000517417 PIK3CD-AS1Q5SR53 167 aa7.93□□□□□ -1.14
PCDHGA1-202ENST00000517417 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 ZNF580Q9UK33 172 aa7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 DCHS2Q6V1P9 2916 aa7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 CXCL5P42830 114 aa7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 C5orf47Q569G3 176 aa7.92□□□□□ -1.14
PCDHGA1-202ENST00000517417 ACYP1P07311 99 aa7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 KIF25-AS1Q9Y6Z4 181 aa7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 IGKV2-24A0A0C4DH68 120 aa7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 TRBV6-8A0A0A6YYG3 113 aa7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 LOC100131303A0A0U1RQF7 123 aa7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
PCDHGA1-202ENST00000517417 SVEP1Q4LDE5 3571 aa7.9□□□□□ -1.14
PCDHGA1-202ENST00000517417 PRB2P02812 416 aaPredicted RBP7.9□□□□□ -1.14
PCDHGA1-202ENST00000517417 MGAM2Q2M2H8 2515 aa7.9□□□□□ -1.14
PCDHGA1-202ENST00000517417 CCDC179H3BU77 68 aa7.9□□□□□ -1.14
PCDHGA1-202ENST00000517417 XAGE1AQ9HD64 81 aa7.9□□□□□ -1.14
PCDHGA1-202ENST00000517417 SPANXCQ9NY87 97 aa7.9□□□□□ -1.15
PCDHGA1-202ENST00000517417 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.15
PCDHGA1-202ENST00000517417 DEFB131BA0A096LNP1 70 aa7.9□□□□□ -1.15
PCDHGA1-202ENST00000517417 LINC00526Q96FQ7 95 aa7.9□□□□□ -1.15
PCDHGA1-202ENST00000517417 MAP1AP78559 2803 aaPredicted RBP7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 SMIM9A6NGZ8 99 aa7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 LYRM9A8MSI8 78 aa7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 LINC00315P59091 139 aa7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 H7C423 109 aa7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 SPANXDQ9BXN6 97 aa7.89□□□□□ -1.15
PCDHGA1-202ENST00000517417 TRBV6-4A0A1B0GX49 114 aa7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 MUC4Q99102 2169 aa7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 ZNF575Q86XF7 245 aa7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 SHISA2Q6UWI4 295 aa7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 MRPS36P82909 103 aaKnown RBP7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 LINC00308Q8TCZ7 52 aa7.88□□□□□ -1.15
PCDHGA1-202ENST00000517417 LST1O00453 97 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 MAST4O15021 2626 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 HILS1P60008 231 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 NREPQ16612 68 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 RBM3P98179 157 aaKnown RBP7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 NDUFS5O43920 106 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 ODF3L2Q3SX64 289 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 ADAMTSL4-AS1Q5T5F5 129 aa7.87□□□□□ -1.15
PCDHGA1-202ENST00000517417 ITPR1Q14643 2758 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 SLPIP03973 132 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 A0A1B0GX51 115 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 JMJD7-PLA2G4BH0Y9G9 81 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 CSMD1Q96PZ7 3565 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 UBE2D4Q9Y2X8 147 aa7.86□□□□□ -1.15
PCDHGA1-202ENST00000517417 UBE2AP49459 152 aa7.85□□□□□ -1.15
PCDHGA1-202ENST00000517417 POM121L12Q8N7R1 296 aa7.85□□□□□ -1.15
PCDHGA1-202ENST00000517417 J3KT08 172 aa7.85□□□□□ -1.15
PCDHGA1-202ENST00000517417 MIFP14174 115 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms