RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Gm20481G3UXK4 153 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm20825J3QM67 227 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ssty2Q149W4 227 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm21394Q497R7 227 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Trav3-3Q5R1C3 114 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Smim7Q5RKS2 75 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm20854Q62461 227 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Zfp420Q7TMN8 578 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Fam78bQ8BQN5 261 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Rnf182Q8C432 247 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Vstm2aQ8R0A6 236 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Atp6v0bQ91V37 205 aa7.76□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Vma21-psA0A140T8R2 101 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 P04943 107 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Rbp4Q00724 201 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ifna11Q61716 190 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Znrd1Q791N7 123 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Prss41Q920S2 322 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Srd5a2Q99N99 254 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 RelnQ60841 3461 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Rpl13aP19253 203 aaKnown RBP7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Id3P41133 119 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gpr183Q3U6B2 357 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 SvipQ3UZP4 77 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Hif1anQ8BLR9 349 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Hist3h2bbQ8CGP0 126 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr1262Q8VGN2 304 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 ChtopQ9CY57 249 aaKnown RBP7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Hist3h2baQ9D2U9 126 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 AY761184Q9D848 116 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Nubp1Q9R060 320 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 BptfA2A654 3036 aaKnown RBP7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Defa35E9QLQ1 93 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm4791J3QQ14 102 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 P01915 264 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Spink6Q8BT20 105 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Mad2l1bpQ9DCX1 276 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 PerpQ9JK95 193 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Osr1Q9WVG7 266 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Igkv1-132A0A0B4J1H9 120 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm6993A0A1W2P738 69 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ccdc71lE9Q4T4 218 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr609E9Q4X7 319 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Bsph2Q0Q236 131 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr150Q60895 312 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Higd1cQ76I25 96 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr491Q8VG06 310 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Prr23a3Q9CWP9 254 aa7.75□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm28845A0A087WR76 214 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 LfngO09010 378 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Svs5P30933 122 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 F7P70375 446 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ttc9cQ810A3 171 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Q8CF25 301 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Rab9aQ9R0M6 201 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Pip4p1Q3TWL2 284 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Pef1Q8BFY6 275 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Scgb3a2Q920H1 91 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 PifoQ9D9W1 207 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Arhgef17Q80U35 2057 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 AU041133A0A0J9YVH3 498 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Cnn1Q08091 297 aaKnown RBP7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ndufb3Q9CQZ6 104 aa7.74□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm10638F6QEG2 257 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Vmn1r78K7N608 313 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 SeboxP70368 190 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Wipf1Q8K1I7 493 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 4930544G11RikQ9CR99 193 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gtsf1Q9DAN6 167 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Zdhhc16Q9ESG8 361 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 EsdQ9R0P3 282 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Med12A2AGH6 2190 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm4565A0A140LJ87 301 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm6812B1AXU1 112 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm6176J3QK59 301 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 1700020N15RikL7MTX3 112 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm4567Q3UTA8 301 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 9130230L23RikQ8CC80 163 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr1440Q8VFV4 315 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr1404Q8VGE1 313 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gpr132Q9Z282 382 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm28269A0A087WSG3 125 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ighv1-19A0A0A6YWX0 117 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 E030018B13RikJ3QMS9 113 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 LtaP09225 202 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Ssty1P13675 232 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Fgf5P15656 264 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Olfr1535Q7TQU0 326 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Poc1aQ8JZX3 405 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Lamtor2Q9JHS3 125 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 CcsQ9WU84 274 aa7.73□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Igkv1-131A0A140T8M8 120 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Klrd1O54707 179 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 PkigO70139 76 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 AgaQ64191 346 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Elovl5Q8BHI7 299 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 AdtrpQ8C138 230 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Gm10309Q8C648 119 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Parm1Q923D3 296 aa7.72□□□□□ -1.17
Sh3rf1-202ENSMUST00000209611 Mpv17lQ99MS3 194 aa7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms