RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Igkv4-74A0A0B4J1I3 119 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tnfsf11O35235 316 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 SlaQ60898 281 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 ChodlQ9CXM0 273 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 SdhdQ9CXV1 159 aa7.87□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm42957D6RFQ2 366 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm20481G3UXK4 153 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Spink8Q09TK9 105 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Klf2Q60843 354 aaKnown RBP7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 OpalinQ7M750 143 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Shisa9Q9CZN4 424 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Lipt2Q9D009 231 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Crybb3Q9JJU9 211 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Nrxn2E9Q7X7 1710 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 GchfrP99025 84 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ighv1-58A0A075B5W9 117 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv6-29A0A0G2JEI6 115 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-63A0A0G2JFU6 117 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Eml6Q5SQM0 1958 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 LgalslbQ7TPX9 165 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ssbp1Q9CYR0 152 aaKnown RBP7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Osr1Q9WVG7 266 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ighv9-3A0A0B4J1J5 117 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm16381A0A1Y7VKT9 73 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 PspnO70300 156 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Thy1P01831 162 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ndufa3Q9CQ91 84 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Cacna1aP97445 2368 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tcrg-V6A0A075B5Y8 134 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm42543A0A0G2JET4 117 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Znrf1Q91V17 227 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem167aQ9CR64 72 aa7.86□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Thap8E9Q695 213 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Socs3O35718 225 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ifitm5O88728 134 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 PolP10400 120 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Lhx2Q9Z0S2 406 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gpr179E9PY61 2293 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Col11a2Q64739 1736 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Trbv12-1A0A0B4J1H0 124 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem141A2AJB2 108 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Gm13199Q8C8E0 125 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Sh3bgrl3Q91VW3 93 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tmem29A2ANF5 204 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ttc9cQ810A3 171 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ndufa7Q9Z1P6 113 aaKnown RBP7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Dkk1O54908 272 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Bcl6bO88282 474 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Rbm3O89086 153 aaKnown RBP7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Il12rb1Q60837 738 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 QrfpQ8CE23 124 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Obox1Q9D350 204 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Marveld3Q9D956 376 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Shisal2aA2A9G7 189 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 P01783 136 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 SpinklQ8CEK3 90 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 TifabQ8JZM6 147 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Nup210Q9QY81 1886 aaKnown RBP7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-78A0A0A6YYE5 119 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 LtaP09225 202 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Znf740Q6NZQ6 180 aa7.85□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Plxnb3Q9QY40 1902 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 E130218I03RikA0A0U1RNU5 63 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 CckP09240 115 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Znf474Q6V5K9 347 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Cox6b1P56391 86 aaKnown RBP7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 AdmP97297 184 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Lhfpl6Q8BM86 200 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ramp3Q9WUP1 147 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Tcf24V9GWT9 166 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Igkv4-69A0A0B4J1I6 116 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 eef1akmt3D3YWP0 232 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ifitm7G3X9Z2 141 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Mpv17P19258 176 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Klf14Q19A41 325 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Samd5Q3V1H9 173 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Ube2v1Q9CZY3 147 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Pkd1l3Q2EG98 2201 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 H2-DMb1P35737 261 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Mrpl16Q99N93 251 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Spata25Q9DA57 226 aa7.84□□□□□ -1.15
Col6a5-201ENSMUST00000165165 Pilrb2Q2YFS1 225 aa7.84□□□□□ -1.16
Col6a5-201ENSMUST00000165165 GalnsQ571E4 520 aa7.84□□□□□ -1.16
Col6a5-201ENSMUST00000165165 ClpsQ9CQC2 113 aa7.84□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Igkv13-84A0A140T8N3 115 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Tnfrsf12aQ9CR75 129 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Zfp707F6QUN2 391 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Fam19a2Q7TPG7 131 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Tdgf1P51865 171 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Jsrp1Q3MI48 332 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Gm5615Q3UW02 101 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 C1ql4Q4ZJM9 238 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Fam168aQ8BGZ2 244 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Susd3Q9D176 269 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Q9DAS2 200 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Ighv3-8A0A075B5T0 131 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Cela3bQ9CQ52 269 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Vmn1r54Q9EPB8 315 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 Gm10521E9PZK0 135 aa7.83□□□□□ -1.16
Col6a5-201ENSMUST00000165165 LeprotO89013 131 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms