RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Trav12d-1A0N8R0 115 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Ifitm10Q8BR26 201 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 GaptQ8CB93 157 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Q91WE4 72 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Igsf23B2RTN2 239 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gng4P50153 75 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Spint3Q3UW09 88 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Wdr83osQ6ZWX0 106 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Poc1aQ8JZX3 405 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Ssbp1Q9CYR0 152 aaKnown RBP9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 G6pc2Q9Z186 355 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Sbf1Q6ZPE2 1867 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Wdfy3Q6VNB8 3508 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Ighv1-67A0A0G2JFN9 117 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 1700031F05RikB1AX30 191 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Olfr918E9PVZ7 325 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 P18528 98 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 GchfrP99025 84 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Fbln7Q501P1 440 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Znf22Q9ERU3 237 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 MylkQ6PDN3 1941 aaKnown RBP9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Trav6d-5A0A075B6B9 112 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 A0A1Y7VMQ4 148 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Igkv4-51A0N8I8 119 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Mmp23O88676 391 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 TcraP01849 138 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 9430097D07RikQ8BS47 195 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Stac2Q8R1B0 408 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 GlmpQ9JHJ3 404 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Lamtor2Q9JHS3 125 aa9.7□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Obp2bA2BHR0 176 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Ca2P00920 260 aaKnown RBP9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Hdgfl3Q9JMG7 202 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Tcrg-C2A0A075B5Z2 167 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Trav8-1A0A075B641 109 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Trav7-5A0A0G2JFX6 112 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 P01853 167 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Tmem95P0DJF3 176 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm5150Q1AN92 299 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 PtprfA2A8L5 1898 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm45785A0A1B0GT05 94 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm21983D6RFS9 131 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Bet1lO35153 111 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Klrd1O54707 179 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 F11rO88792 300 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Sox21Q811W0 276 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 8030423J24RikQ9CX45 142 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 PerpQ9JK95 193 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Hs3st3b1Q9QZS6 390 aa9.69□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Tmem29A2ANF5 204 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Nup37Q9CWU9 326 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Igkv4-50A0A0B4J1J0 117 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm21874J3QNZ6 232 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Tnfsf11O35235 316 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 BC106179Q8C9L1 186 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Klk10Q99M20 278 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 PolqQ8CGS6 2544 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Slc25a53A2AF28 346 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Tnfrsf26P83626 204 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Olfr1419Q7TQS2 343 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Olfr1333Q7TQV7 317 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Cdh23Q99PF4 3354 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Trav3n-3A0A0G2JEM0 114 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Rnase2bO35292 155 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Lynx1P0DP60 116 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Lyzl1Q9CPX3 148 aa9.68□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Greb1Q3UHK3 1954 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm17727E9Q4V7 109 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Pax8Q00288 457 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 H2al1nQ497L1 109 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 SlaQ60898 281 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Olfr904Q7TRC9 310 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm4894Q8CA09 118 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Crybb3Q9JJU9 211 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Trbv12-2A0A0B4J1H1 124 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Igkv6-14A0A140T8P1 115 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Trbv17A0A140T8P8 114 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Tmem238lA0A1B0GS74 79 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Pcp4P63054 62 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 C1qtnf4Q8R066 326 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 4930544G11RikQ9CR99 193 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Thsd7bQ6P4U0 1607 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Ttc28Q80XJ3 2450 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Zfp950A0A0U1RQ46 609 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 eef1akmt3D3YWP0 232 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm6040Q4QY32 63 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Anapc13Q8R034 74 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Mrpl16Q99N93 251 aa9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 ChtopQ9CY57 249 aaKnown RBP9.67□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Zfp27P10077 819 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Zfp36P22893 319 aaKnown RBP9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Defa2P28309 93 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Jpt2Q6PGH2 190 aaKnown RBP9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Cox19Q8K0C8 92 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 DnlzQ9D113 177 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Igkv14-100A0A0G2JG36 117 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 3110082J24RikF6Z6Z2 108 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Gm21370Q3T9V6 190 aa9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Prr3Q811B5 190 aaKnown RBP9.66□□□□□ -0.86
Ndc1-204ENSMUST00000139560 Cnn3Q9DAW9 330 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms