RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gm28372A0A087WNV0 220 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 AU041133A0A0J9YVH3 498 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr709-ps1A0A140T8J9 307 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gm45800A0A1B0GT24 152 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 P01915 264 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ssty1P13675 232 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 ParlQ5XJY4 377 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr124Q8VGW6 315 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Etfrf1Q91V16 86 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Trbv13-3A0A0B4J1H2 113 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 HrkP62816 92 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Samd5Q3V1H9 173 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Cd200r3Q5UKY4 296 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr1535Q7TQU0 326 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Q8CF25 301 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr1440Q8VFV4 315 aa11.68□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gm15293D3YX02 93 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr15P23275 312 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Stfa1P35175 97 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Zfand3Q497H0 227 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Slc25a29Q8BL03 306 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 TecrQ9CY27 308 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Fam241aQ9CZL2 131 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ighv8-2A0A0A6YW58 119 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Mettl8A2AUU0 281 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 P01792 123 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 GzmfP08883 248 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Myod1P10085 318 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Rpl23P62830 140 aaKnown RBP11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 EtdQ80SW5 59 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Eda2rQ8BX35 297 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 ArtnQ9Z0L2 224 aa11.67□□□□□ -0.54
Nup88-202ENSMUST00000108530 Scgb1b12A0A087WP21 93 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gm20422E9PUR3 255 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Pde6dO55057 150 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Hist1h2bfP10853 126 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Hist1h2bbQ64475 126 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Nanos1Q80WY3 267 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Hist1h2bkQ8CGP1 126 aaKnown RBP11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Hist1h2bpQ8CGP2 126 aaKnown RBP11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ido2Q8R0V5 405 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 RpeQ8VEE0 228 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Derl1Q99J56 251 aa11.66□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ighv1-39A0A075B5V5 117 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 P01726 129 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Cma2Q91VB1 246 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Glrx2Q923X4 156 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Atp6v0e1Q9CQD8 81 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 CklfQ9DAS1 152 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr1326-ps1A0A140T8J7 311 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Cldn1O88551 211 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ube2l3P68037 154 aaKnown RBP11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Q497N7 227 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 Uqcc1Q9CWU6 295 aa11.65□□□□□ -0.54
Nup88-202ENSMUST00000108530 ColqO35348 457 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 P03980 138 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 P04219 140 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 P04944 107 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Sult1a1P52840 291 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr1472Q7TQQ9 314 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Habp2Q8K0D2 558 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Hoxc12Q8K5B8 280 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr1258Q8VGN6 311 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 ManfQ9CXI5 179 aaKnown RBP11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Kcnip3Q9QXT8 256 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Vamp5Q9Z2P8 102 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Zfp931A2AHM2 298 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Tmem29A2ANF5 204 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 SelenotP62342 195 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Tmem256Q5F285 113 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm9913Q8BQQ2 135 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr968Q8VFN4 314 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Spaca3Q9D9X8 221 aa11.64□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr748E9Q9Z0 307 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 P01674 108 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Sox15P43267 231 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Sumo1P63166 101 aaKnown RBP11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 BC100530Q497J0 97 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr263Q7TQT8 317 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Slc31a2Q9CPU9 143 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Spink12Q9D256 87 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Trav4-4-dv10A0A075B651 110 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Fndc10A2A9Q0 223 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm5239D3YYZ2 122 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Crip1P63254 77 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr433Q7TRV9 314 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Smim19Q80ZU4 107 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Ms4a6bQ99N09 244 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Mrpl16Q99N93 251 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr972Q9EQA2 314 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Rab9aQ9R0M6 201 aa11.63□□□□□ -0.55
Nup88-202ENSMUST00000108530 Tnfsf11O35235 316 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Adcyap1O70176 175 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Mtco2P00405 227 aaKnown RBP11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Edn2P22389 175 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Oosp2Q4FZG8 168 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Olfr403Q7TRX2 313 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Tmem167bQ80X45 74 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Klhdc1Q80YG3 406 aa11.62□□□□□ -0.55
Nup88-202ENSMUST00000108530 Gm12689Q8BQU9 117 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms