Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Pde6dO55057 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,32■■□□□ 1,8
Pde6dO55057 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Pde6dO55057 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Pde6dO55057 Psd-208ENSMUST00000224556 2034 ntBASIC25,68■■□□□ 1,7
Pde6dO55057 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Pde6dO55057 Gm25239-201ENSMUST00000174915 86 ntBASIC25,16■■□□□ 1,62
Pde6dO55057 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,76■■□□□ 1,55
Pde6dO55057 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,7■■□□□ 1,54
Pde6dO55057 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Pde6dO55057 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Pde6dO55057 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Pde6dO55057 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Pde6dO55057 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,22■■□□□ 1,47
Pde6dO55057 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Pde6dO55057 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Pde6dO55057 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,02■■□□□ 1,44
Pde6dO55057 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,88■■□□□ 1,41
Pde6dO55057 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,72■■□□□ 1,39
Pde6dO55057 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,64■■□□□ 1,37
Pde6dO55057 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,61■■□□□ 1,37
Pde6dO55057 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,44■■□□□ 1,34
Pde6dO55057 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Pde6dO55057 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,33■■□□□ 1,33
Pde6dO55057 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Pde6dO55057 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Pde6dO55057 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,23■■□□□ 1,31
Pde6dO55057 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,13■■□□□ 1,29
Pde6dO55057 Gm15042-201ENSMUST00000120212 883 ntBASIC23,1■■□□□ 1,29
Pde6dO55057 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,07■■□□□ 1,28
Pde6dO55057 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,05■■□□□ 1,28
Pde6dO55057 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,04■■□□□ 1,28
Pde6dO55057 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,97■■□□□ 1,27
Pde6dO55057 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,95■■□□□ 1,26
Pde6dO55057 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,94■■□□□ 1,26
Pde6dO55057 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,92■■□□□ 1,26
Pde6dO55057 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,91■■□□□ 1,26
Pde6dO55057 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Pde6dO55057 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,9■■□□□ 1,26
Pde6dO55057 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,89■■□□□ 1,25
Pde6dO55057 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,86■■□□□ 1,25
Pde6dO55057 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22,81■■□□□ 1,24
Pde6dO55057 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,77■■□□□ 1,24
Pde6dO55057 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,77■■□□□ 1,24
Pde6dO55057 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22,74■■□□□ 1,23
Pde6dO55057 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,73■■□□□ 1,23
Pde6dO55057 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,72■■□□□ 1,23
Pde6dO55057 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Pde6dO55057 Gm15045-201ENSMUST00000117359 883 ntBASIC22,71■■□□□ 1,23
Pde6dO55057 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,71■■□□□ 1,23
Pde6dO55057 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,64■■□□□ 1,22
Pde6dO55057 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22,64■■□□□ 1,21
Pde6dO55057 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,63■■□□□ 1,21
Pde6dO55057 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,54■■□□□ 1,2
Pde6dO55057 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,53■■□□□ 1,2
Pde6dO55057 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Pde6dO55057 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
Pde6dO55057 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,42■■□□□ 1,18
Pde6dO55057 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Pde6dO55057 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,31■■□□□ 1,16
Pde6dO55057 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Pde6dO55057 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,26■■□□□ 1,15
Pde6dO55057 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Pde6dO55057 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,22■■□□□ 1,15
Pde6dO55057 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,18■■□□□ 1,14
Pde6dO55057 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,17■■□□□ 1,14
Pde6dO55057 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,14■■□□□ 1,14
Pde6dO55057 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,12■■□□□ 1,13
Pde6dO55057 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,12■■□□□ 1,13
Pde6dO55057 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Pde6dO55057 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,09■■□□□ 1,13
Pde6dO55057 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,06■■□□□ 1,12
Pde6dO55057 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Pde6dO55057 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,04■■□□□ 1,12
Pde6dO55057 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22,03■■□□□ 1,12
Pde6dO55057 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Pde6dO55057 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,98■■□□□ 1,11
Pde6dO55057 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Pde6dO55057 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,89■■□□□ 1,09
Pde6dO55057 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Pde6dO55057 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,82■■□□□ 1,08
Pde6dO55057 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,79■■□□□ 1,08
Pde6dO55057 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,78■■□□□ 1,08
Pde6dO55057 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Pde6dO55057 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21,71■■□□□ 1,07
Pde6dO55057 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,7■■□□□ 1,07
Pde6dO55057 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21,69■■□□□ 1,06
Pde6dO55057 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21,68■■□□□ 1,06
Pde6dO55057 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
Pde6dO55057 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
Pde6dO55057 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,66■■□□□ 1,06
Pde6dO55057 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Pde6dO55057 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,65■■□□□ 1,06
Pde6dO55057 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,65■■□□□ 1,06
Pde6dO55057 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,59■■□□□ 1,05
Pde6dO55057 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,58■■□□□ 1,04
Pde6dO55057 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21,57■■□□□ 1,04
Pde6dO55057 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Pde6dO55057 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,56■■□□□ 1,04
Pde6dO55057 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,52■■□□□ 1,04
Retrieved 100 of 76,532 protein–RNA pairs in 9,7 ms