RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Ighv1-34A0A075B5V2 117 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Scgb1b11A0A087WQJ0 93 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Igkv4-50A0A0B4J1J0 117 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rnf166Q3U9F6 237 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tmprss12Q3V0Q7 336 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Hist2h2beQ64524 126 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Dirc2Q8BFQ6 478 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 E130116L18RikQ8BMV6 101 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 9130230L23RikQ8CC80 163 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1350Q8VF34 308 aa5.63□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr284A0A0U1RP76 321 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm44501A8R0T9 150 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Esp24A8R0V6 68 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 BC035044E0CXF8 138 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Scgb1b19F6WYW0 93 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Nxph4G3X9N5 304 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r78K7N608 313 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Prss44Q402U7 372 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cd200r4Q6XJV4 270 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Mob3aQ8BSU7 217 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Nrn1Q8CFV4 142 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr1271Q8VG62 305 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Abhd14aQ922Q6 247 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Nkg7Q99PA5 165 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 GgctQ9D7X8 188 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm12886B1AZM5 119 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r1E9PVR6 306 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21746J3QMM6 180 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P18530 117 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Mfge8P21956 463 aaKnown RBP5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Shisa3Q3UPR0 238 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21943Q5FWD5 227 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Klk15Q8CGR4 254 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 HpxQ91X72 460 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Nit2Q9JHW2 276 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rab37Q9JKM7 223 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Trav7n-5A0A075B604 112 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Zfp764E9QAP1 431 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P01803 113 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Phxr2P15972 65 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Il11P47873 199 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cd200r3Q5UKY4 296 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ifna14Q810G3 189 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Trpt1Q8K3A2 249 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Q8VC23 124 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr482Q8VG03 323 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cacng8Q8VHW2 423 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Klk10Q99M20 278 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr972Q9EQA2 314 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Tex101Q9JMI7 250 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm3233E9Q2H5 230 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21994F6T2D2 329 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ins1P01325 108 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cks1bP61025 79 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ube2l3P68037 154 aaKnown RBP5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Neurog3P70661 214 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 SlpiP97430 131 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Vmn1r195Q5SVD6 316 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Zdhhc23Q5Y5T3 425 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr876Q7TRE4 310 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ndufb3Q9CQZ6 104 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Coa3Q9D2R6 108 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Lamtor2Q9JHS3 125 aa5.62□□□□□ -1.51
Bdnf-201ENSMUST00000053317 PtprqP0C5E4 2300 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ighv5-17A0A075B5R1 117 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Trav3n-3A0A0G2JEM0 114 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Znf385cA2A5E6 429 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Pitx3O35160 302 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Pet117P0DJF2 80 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Fgf5P15656 264 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 TspoP50637 169 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 C1qtnf9Q4ZJN1 333 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ifna11Q61716 190 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Lsm11Q8BUV6 361 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Mrpl20Q9CQL4 149 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ufc1Q9CR09 167 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 9130008F23RikQ9D2Z6 181 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Rbmxl2Q9DAE2 385 aaKnown RBP5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Cbln3Q9JHG0 197 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Itpr2Q9Z329 2701 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Muc4Q8JZM8 3443 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm29049A0A087WSM5 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm2381G3UY53 305 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm21118J3QPK8 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Ccr6O54689 367 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 P04945 108 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Khdc1bP0C7A0 126 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Mdga2P60755 949 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20909Q5FWB5 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20852Q5M8R5 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20917Q62457 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20809Q62458 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20865Q62460 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20738Q810R8 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Olfr355Q8VFP6 310 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 H2al3Q9D4U4 128 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 4930447A16RikQ9D5F6 132 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Srp19Q9D7A6 144 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 Gm20806Q9D9T3 227 aa5.61□□□□□ -1.51
Bdnf-201ENSMUST00000053317 DeddQ9Z1L3 318 aa5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms