Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Lsm11Q8BUV6 Gm25239-201ENSMUST00000174915 86 ntBASIC29,18■■■□□ 2,26
Lsm11Q8BUV6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,49■■■□□ 2,15
Lsm11Q8BUV6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Lsm11Q8BUV6 Psd-208ENSMUST00000224556 2034 ntBASIC27,73■■■□□ 2,03
Lsm11Q8BUV6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
Lsm11Q8BUV6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,08■■□□□ 1,93
Lsm11Q8BUV6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Lsm11Q8BUV6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Lsm11Q8BUV6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26,6■■□□□ 1,85
Lsm11Q8BUV6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Lsm11Q8BUV6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Lsm11Q8BUV6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Lsm11Q8BUV6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Lsm11Q8BUV6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Lsm11Q8BUV6 Gm15042-201ENSMUST00000120212 883 ntBASIC26,27■■□□□ 1,8
Lsm11Q8BUV6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,22■■□□□ 1,79
Lsm11Q8BUV6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Lsm11Q8BUV6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,02■■□□□ 1,76
Lsm11Q8BUV6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,9■■□□□ 1,74
Lsm11Q8BUV6 Gm15045-201ENSMUST00000117359 883 ntBASIC25,89■■□□□ 1,74
Lsm11Q8BUV6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Lsm11Q8BUV6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,71■■□□□ 1,71
Lsm11Q8BUV6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,68■■□□□ 1,7
Lsm11Q8BUV6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,56■■□□□ 1,68
Lsm11Q8BUV6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Lsm11Q8BUV6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Lsm11Q8BUV6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Lsm11Q8BUV6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Lsm11Q8BUV6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,39■■□□□ 1,66
Lsm11Q8BUV6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,39■■□□□ 1,65
Lsm11Q8BUV6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,33■■□□□ 1,65
Lsm11Q8BUV6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,27■■□□□ 1,64
Lsm11Q8BUV6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,26■■□□□ 1,63
Lsm11Q8BUV6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,26■■□□□ 1,63
Lsm11Q8BUV6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
Lsm11Q8BUV6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Lsm11Q8BUV6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Lsm11Q8BUV6 Gm24109-201ENSMUST00000175489 103 ntBASIC24,97■■□□□ 1,59
Lsm11Q8BUV6 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,96■■□□□ 1,59
Lsm11Q8BUV6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,59
Lsm11Q8BUV6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,95■■□□□ 1,58
Lsm11Q8BUV6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Lsm11Q8BUV6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24,9■■□□□ 1,58
Lsm11Q8BUV6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,78■■□□□ 1,56
Lsm11Q8BUV6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,76■■□□□ 1,55
Lsm11Q8BUV6 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,73■■□□□ 1,55
Lsm11Q8BUV6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24,66■■□□□ 1,54
Lsm11Q8BUV6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Lsm11Q8BUV6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Lsm11Q8BUV6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Lsm11Q8BUV6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24,56■■□□□ 1,52
Lsm11Q8BUV6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24,46■■□□□ 1,51
Lsm11Q8BUV6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,45■■□□□ 1,51
Lsm11Q8BUV6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Lsm11Q8BUV6 Gm23366-201ENSMUST00000175022 89 ntBASIC24,43■■□□□ 1,5
Lsm11Q8BUV6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Lsm11Q8BUV6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Lsm11Q8BUV6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,34■■□□□ 1,49
Lsm11Q8BUV6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Lsm11Q8BUV6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,29■■□□□ 1,48
Lsm11Q8BUV6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Lsm11Q8BUV6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Lsm11Q8BUV6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,29■■□□□ 1,48
Lsm11Q8BUV6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,25■■□□□ 1,47
Lsm11Q8BUV6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24,15■■□□□ 1,46
Lsm11Q8BUV6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Lsm11Q8BUV6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Lsm11Q8BUV6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Lsm11Q8BUV6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,08■■□□□ 1,44
Lsm11Q8BUV6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,05■■□□□ 1,44
Lsm11Q8BUV6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,05■■□□□ 1,44
Lsm11Q8BUV6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Lsm11Q8BUV6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,03■■□□□ 1,44
Lsm11Q8BUV6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23,97■■□□□ 1,43
Lsm11Q8BUV6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,94■■□□□ 1,42
Lsm11Q8BUV6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
Lsm11Q8BUV6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,83■■□□□ 1,41
Lsm11Q8BUV6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23,83■■□□□ 1,41
Lsm11Q8BUV6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23,8■■□□□ 1,4
Lsm11Q8BUV6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23,77■■□□□ 1,4
Lsm11Q8BUV6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,76■■□□□ 1,39
Lsm11Q8BUV6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Lsm11Q8BUV6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23,71■■□□□ 1,39
Lsm11Q8BUV6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Lsm11Q8BUV6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23,63■■□□□ 1,37
Lsm11Q8BUV6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23,58■■□□□ 1,37
Lsm11Q8BUV6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Lsm11Q8BUV6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Lsm11Q8BUV6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23,53■■□□□ 1,36
Lsm11Q8BUV6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Lsm11Q8BUV6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Lsm11Q8BUV6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23,44■■□□□ 1,34
Lsm11Q8BUV6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23,43■■□□□ 1,34
Lsm11Q8BUV6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,43■■□□□ 1,34
Lsm11Q8BUV6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23,42■■□□□ 1,34
Lsm11Q8BUV6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,42■■□□□ 1,34
Lsm11Q8BUV6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Lsm11Q8BUV6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23,37■■□□□ 1,33
Lsm11Q8BUV6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Retrieved 100 of 76,532 protein–RNA pairs in 38,5 ms