RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Rif1Q6PR54 2419 aaKnown RBP8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Olfr177E9Q7W1 309 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Pax1P09084 446 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Wnt5bP22726 359 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Defa-rs7P50715 91 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 C330021F23RikQ8C7T0 141 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Tmem89Q9DA04 169 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Hdgfl3Q9JMG7 202 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Trav7n-4A0A075B620 113 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Iglv3A0A0B4J1K5 122 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Tmem8bB1AWJ5 472 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Rnase2bO35292 155 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 P01655 112 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Tmem241Q3UME2 297 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Tmprss12Q3V0Q7 336 aa8.23□□□□□ -1.09
Ldlr-201ENSMUST00000034713 eef1akmt3D3YWP0 232 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 GchfrP99025 84 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 PcolceQ61398 468 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Olfr1333Q7TQV7 317 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Gm9945Q8BNZ3 91 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Srd5a2Q99N99 254 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Ube2cQ9D1C1 179 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Ndufa11Q9D8B4 141 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 A0A1Y7VMQ4 148 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Tmem29A2ANF5 204 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Wisp3D3Z5L9 354 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 TymsP07607 307 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Znf691Q3TDE8 283 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Cops9Q3U898 57 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Scrt1Q99M85 348 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Gm14214V9GX35 225 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Myo9bQ9QY06 2114 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Zfp27P10077 819 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Rtn4rl2Q7M6Z0 420 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Ss18l1Q8BW22 402 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Bles03Q8VD62 251 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 AplnrQ9WV08 377 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Rps2-ps6A0A140T8L5 221 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Gm45717A0A1B0GT68 152 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Gm9733Q1AN91 178 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Gtf3aQ8VHT7 364 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Sh3bgrl3Q91VW3 93 aa8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Mrps11Q9DCA2 191 aaKnown RBP8.22□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Tmem200bD3Z0P8 284 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Gm21974F6W3F3 119 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 PlnP61014 52 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Ssbp4Q3U4B1 363 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Dtx1Q61010 627 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Olfr523Q8VFE7 317 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Prss41Q920S2 322 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Q9D8L0 127 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Timm10bQ9WV96 100 aa8.21□□□□□ -1.09
Ldlr-201ENSMUST00000034713 Nr2c2apQ3TV70 140 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Tm2d3Q8BJ83 261 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Gm4894Q8CA09 118 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Pxt1Q8K459 51 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 GlmpQ9JHJ3 404 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Dctn5Q9QZB9 182 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Id3P41133 119 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 LbhQ9CX60 105 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Ssbp1Q9CYR0 152 aaKnown RBP8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Znf22Q9ERU3 237 aa8.21□□□□□ -1.1
Ldlr-201ENSMUST00000034713 P01660 111 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 P18525 117 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Mbd6Q3TY92 1003 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Timm21Q8CCM6 249 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Olfr33Q8VGX7 318 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Trav16nA0A075B634 117 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Igkv13-85A0A075B666 115 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Ighv7-2A0A0A6YX91 119 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Igsf23B2RTN2 239 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Rnf5O35445 180 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Pfn1P62962 140 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Isg15Q64339 161 aaKnown RBP8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Wfdc21Q8BTE6 63 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Mbnl2Q8C181 373 aaKnown RBP8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Prss29Q99MS4 279 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Tmem50aQ9CXL1 157 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 4930583I09RikQ9D2E3 102 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Hils1Q9QYL0 170 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Dopey1Q8BL99 2399 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Trbv13-3A0A0B4J1H2 113 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Gm21983D6RFS9 131 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Rnase2O35291 155 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Il3raP26952 396 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Tmem256Q5F285 113 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Pth2Q91W27 100 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Sh2d6Q9D413 297 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Trbv3A0A0A6YYE2 117 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Spint5J3KMK8 105 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Gata2O09100 480 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Foxf2O54743 446 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Hs3st6Q5GFD5 342 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Klhdc1Q80YG3 406 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Pip4p2Q9CZX7 257 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 H2al3Q9D4U4 128 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 GgctQ9D7X8 188 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Gpr35Q9ES90 307 aa8.2□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Smad7O35253 426 aa8.19□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Otx1P80205 355 aa8.19□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms