RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Polr3kQ9CQZ7 108 aa12.68□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gm20219A0A1B0GRQ3 87 aa12.68□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Umad1E0CX23 159 aa12.68□□□□□ -0.38
Col2a1-201ENSMUST00000023123 SeleQ00690 612 aa12.68□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Trav6d-4Q5R1I0 115 aa12.68□□□□□ -0.38
Col2a1-201ENSMUST00000023123 GlmpQ9JHJ3 404 aa12.68□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Tspoap1Q7TNF8 1846 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Ms4a12A0A087WSB9 263 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gm17727E9Q4V7 109 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Nat6Q9R123 314 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Ighv1-76A0A0G2JFE9 117 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Wisp1O54775 367 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Foxl1Q64731 336 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 ChodlQ9CXM0 273 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gpr179E9PY61 2293 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gm10203F6QJ09 66 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Adrb3P25962 400 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Dnajc13D4AFX7 2248 aaKnown RBP12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Loxhd1C8YR32 2068 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Il3raP26952 396 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 RflnaQ7TS73 204 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gnb1lQ9EQ15 326 aa12.67□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Trav4-4-dv10A0A075B651 110 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Ccl17F6R5P4 103 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Ucp1P12242 307 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Spint3Q3UW09 88 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Znf664Q4VA44 261 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Mbnl2Q8C181 373 aaKnown RBP12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Malrd1A2AJX4 2123 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Trav6d-3A0A075B6B3 112 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Igkv6-14A0A140T8P1 115 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Znf431E9QAG8 526 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 CrygsO35486 178 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Dkk1O54908 272 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Zfp11P10751 647 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Fgf4P11403 202 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Trav6-3Q5R1E6 112 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gm1553Q66VB7 94 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Pth2Q91W27 100 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Ighv9-3A0A0B4J1J5 117 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Pcp4P63054 62 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Srsf1Q6PDM2 248 aaKnown RBP12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 3100002H09RikQ9CXW6 140 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 QrfpQ8CE23 124 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Arpc1aQ9R0Q6 370 aa12.66□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Trav7n-5A0A075B604 112 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Cd59bP58019 129 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Lrrc25Q8K1T1 297 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Zfp119aQ9JIC0 545 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 HilpdaQ9JLS0 64 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Tcrg-V6A0A075B5Y8 134 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Gm933J3QPC1 141 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Ssbp4Q3U4B1 363 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Rnf151Q9CQ29 239 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Lgals6O54891 301 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Olfr975Q8VG91 310 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Olfr477Q8VGI6 310 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 IcosQ9WVS0 200 aa12.65□□□□□ -0.38
Col2a1-201ENSMUST00000023123 Tmem256Q5F285 113 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Olfr1367Q8VFG2 316 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Olfr364-ps1A0A140T8Q2 307 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Zfp36l2P23949 484 aaKnown RBP12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Q91WE4 72 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Ormdl2Q9CQZ0 153 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Ube2v1Q9CZY3 147 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Crybb3Q9JJU9 211 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Iglc2P01844 104 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 TcraP01849 138 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Vmn1r197Q8R265 298 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Dtx2Q8R3P2 619 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Q9D727 114 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Plpp2Q9DAX2 276 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Cd5lQ9QWK4 352 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Lhx2Q9Z0S2 406 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Gbf1Q6DFZ1 1861 aa12.64□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Trbv19A0A0B4J1H4 117 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Defa2P28309 93 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Defa-rs12P50716 91 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Oosp2Q4FZG8 168 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Prima1Q810F0 153 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Gm10762Q9CZN6 115 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Igh-VJ558P01758 117 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Ubald2Q8BQH4 164 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Tm4sf20Q9CQY8 226 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Iah1Q9DB29 249 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Mrps11Q9DCA2 191 aaKnown RBP12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Dusp14Q9JLY7 198 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Zfhx2Q2MHN3 2562 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Isg15Q64339 161 aaKnown RBP12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Mzt1Q8BUR9 78 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Fxyd1Q9Z239 92 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Gm17732E9Q5I2 61 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Ifitm2Q99J93 144 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Lyzl1Q9CPX3 148 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Phlda3Q9WV95 125 aa12.63□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Gm45521A0A1B0GRK0 198 aa12.62□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Spink6Q8BT20 105 aa12.62□□□□□ -0.39
Col2a1-201ENSMUST00000023123 GrhprQ91Z53 328 aa12.62□□□□□ -0.39
Col2a1-201ENSMUST00000023123 Spaca3Q9D9X8 221 aa12.62□□□□□ -0.39
Col2a1-201ENSMUST00000023123 P01657 111 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 153.3 ms