RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr492Q8VFD1 314 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Plxdc1Q91ZV7 500 aa13.28□□□□□ -0.28
Shh-201ENSMUST00000002708 Igll1P20764 209 aa13.27□□□□□ -0.28
Shh-201ENSMUST00000002708 Slc17a2Q5SZA1 478 aa13.27□□□□□ -0.28
Shh-201ENSMUST00000002708 Olfr148Q60887 310 aa13.27□□□□□ -0.28
Shh-201ENSMUST00000002708 V1ra8Q9EQ48 279 aa13.27□□□□□ -0.28
Shh-201ENSMUST00000002708 Tpsg1Q9QUL7 311 aa13.27□□□□□ -0.28
Shh-201ENSMUST00000002708 Ncoa6Q9JL19 2067 aa13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr1098A2AVB0 315 aa13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 Ascl5M0QWB7 188 aa13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 Bmp5P49003 452 aa13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 Rpl8P62918 257 aaKnown RBP13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 Dnd1Q6VY05 352 aa13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr984Q8VFN1 314 aa13.27□□□□□ -0.29
Shh-201ENSMUST00000002708 P04942 107 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Q08AU9 97 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Trav15-1-dv6-1Q5R1D2 117 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Q9DAA3 117 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Dram1Q9DC58 238 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Zfp292Q9Z2U2 2698 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Lama5Q61001 3718 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Hoxa6P09092 232 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 P18525 117 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 P18526 117 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Rnase9P60154 184 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 OstcQ78XF5 149 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr1272Q8VGN8 308 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Cisd1Q91WS0 108 aaKnown RBP13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Rnf2Q9CQJ4 336 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Oxld1Q9CR10 201 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Nhp2Q9CRB2 153 aaKnown RBP13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Fam162bQ9CX19 157 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 PigpQ9JHG1 132 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm11027G8JL69 66 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 CtsgP28293 261 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr965Q7TRA7 312 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Klf17Q8CFA7 341 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr491Q8VG06 310 aa13.26□□□□□ -0.29
Shh-201ENSMUST00000002708 P01649 108 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 5730522E02RikQ5SP45 163 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm10277Q6R5C6 214 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr266Q8VFC3 316 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Tmub1Q9JMG3 245 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Fcrl6A1YIY0 268 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15128A2ADW8 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15080A2BI02 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15093A2BI72 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Luzp4B1AV09 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15107B1B0X0 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15097E9QA14 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm21974F6W3F3 119 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Cxcl13O55038 109 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Cox6a1P43024 111 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gcm1P70348 436 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Dtx1Q61010 627 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15085Q62012 449 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm5468Q8C3D3 155 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Cox19Q8K0C8 92 aa13.25□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr1337A2ACY8 315 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15127B1AVZ5 449 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm15091B1AZM2 449 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm21775J3KMK6 180 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Mmp23O88676 391 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Gpm6bP35803 328 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 CrygcQ61597 174 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr1265Q8VEZ3 309 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm6993A0A1W2P738 69 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Rnf212F6TQD1 307 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Rpl27aP14115 148 aaKnown RBP13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Txn2P97493 166 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Ube2cQ9D1C1 179 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Plpp2Q9DAX2 276 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr19Q9JHB2 309 aa13.24□□□□□ -0.29
Shh-201ENSMUST00000002708 P18530 117 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Siah2Q06986 325 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr1472Q7TQQ9 314 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm9945Q8BNZ3 91 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Sh2d6Q9D413 297 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Tmem126aQ9D8Y1 196 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Dopey1Q8BL99 2399 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm5093E9PZB3 174 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Ccl11P48298 97 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Ms4a13Q5FWC3 203 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Duxbl2Q7TNE6 350 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 CrebbpP45481 2441 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Abca4O35600 2310 aa13.23□□□□□ -0.29
Shh-201ENSMUST00000002708 Trav7n-4A0A075B620 113 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Cdpf1Q8R3A2 119 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Gm17654F7AXR3 209 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 P01723 117 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Prrx1P63013 245 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Rbp4Q00724 201 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 A930003A15RikQ3U552 87 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Ifna12Q80SS5 189 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 COA4Q8BT51 87 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 RnasekQ8K3C0 98 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Olfr1195Q8VG21 308 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Vmn1r61W4VSP5 300 aa13.22□□□□□ -0.29
Shh-201ENSMUST00000002708 Ms4a12A0A087WSB9 263 aa13.21□□□□□ -0.29
Shh-201ENSMUST00000002708 Hoxa1P09022 331 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms