RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeastyeast

Gene HAL1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HAL1YPR005C CDC20P26309 610 aa6.15□□□□□ -1.42
HAL1YPR005C PRP45P28004 379 aaPredicted RBP6.15□□□□□ -1.42
HAL1YPR005C PXA2P34230 853 aa6.15□□□□□ -1.42
HAL1YPR005C CTF13P35203 478 aa6.15□□□□□ -1.42
HAL1YPR005C NOP4P37838 685 aaKnown RBP6.15□□□□□ -1.42
HAL1YPR005C COG1P53079 417 aa6.15□□□□□ -1.42
HAL1YPR005C PCD1Q12524 340 aa6.15□□□□□ -1.42
HAL1YPR005C YOR111WQ99210 232 aa6.15□□□□□ -1.42
HAL1YPR005C RED1P14291 827 aa6.14□□□□□ -1.43
HAL1YPR005C OLE1P21147 510 aaKnown RBP6.14□□□□□ -1.43
HAL1YPR005C SWC3P31376 625 aa6.14□□□□□ -1.43
HAL1YPR005C VMA8P32610 256 aaKnown RBP6.14□□□□□ -1.43
HAL1YPR005C PEX5P35056 612 aa6.14□□□□□ -1.43
HAL1YPR005C STB5P38699 743 aa6.14□□□□□ -1.43
HAL1YPR005C YIL077CP40508 320 aa6.14□□□□□ -1.43
HAL1YPR005C IST3P40565 148 aaPredicted RBP6.14□□□□□ -1.43
HAL1YPR005C ZAP1P47043 880 aa6.14□□□□□ -1.43
HAL1YPR005C MTL1P53214 551 aa6.14□□□□□ -1.43
HAL1YPR005C MRPS35P53292 345 aa6.14□□□□□ -1.43
HAL1YPR005C SYF1Q04048 859 aaPredicted RBP6.14□□□□□ -1.43
HAL1YPR005C YLR352WQ06479 807 aa6.14□□□□□ -1.43
HAL1YPR005C RRG1Q12167 365 aaPredicted RBP6.14□□□□□ -1.43
HAL1YPR005C SOD2P00447 233 aa6.13□□□□□ -1.43
HAL1YPR005C RPS13P05756 151 aaKnown RBP6.13□□□□□ -1.43
HAL1YPR005C TY2A-LR1P0C2J4 438 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-FP0CX61 438 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-GR2P0CX62 438 aa6.13□□□□□ -1.43
HAL1YPR005C CAD1P24813 409 aaKnown RBP6.13□□□□□ -1.43
HAL1YPR005C RNQ1P25367 405 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-CP25383 438 aa6.13□□□□□ -1.43
HAL1YPR005C GCD7P32502 381 aaPredicted RBP6.13□□□□□ -1.43
HAL1YPR005C COS111P38308 924 aa6.13□□□□□ -1.43
HAL1YPR005C YBR225WP38321 900 aa6.13□□□□□ -1.43
HAL1YPR005C LYS9P38999 446 aa6.13□□□□□ -1.43
HAL1YPR005C PIG2P40187 538 aa6.13□□□□□ -1.43
HAL1YPR005C ARC1P46672 376 aaKnown RBP6.13□□□□□ -1.43
HAL1YPR005C SPT20P50875 604 aa6.13□□□□□ -1.43
HAL1YPR005C YPL108WQ02872 168 aaPredicted RBP6.13□□□□□ -1.43
HAL1YPR005C TY2A-DR2Q03483 438 aa6.13□□□□□ -1.43
HAL1YPR005C ICL2Q12031 575 aa6.13□□□□□ -1.43
HAL1YPR005C HUA2Q12134 243 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-BQ12260 438 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-OR2Q12293 438 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-DR1Q12392 438 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-OR1Q12439 438 aa6.13□□□□□ -1.43
HAL1YPR005C TY2A-DR3Q99303 438 aa6.13□□□□□ -1.43
HAL1YPR005C GCN4P03069 281 aa6.12□□□□□ -1.43
HAL1YPR005C HOM3P10869 527 aa6.12□□□□□ -1.43
HAL1YPR005C CDC24P11433 854 aaPredicted RBP6.12□□□□□ -1.43
HAL1YPR005C MRP20P32387 263 aa6.12□□□□□ -1.43
HAL1YPR005C TSA1P34760 196 aaKnown RBP6.12□□□□□ -1.43
HAL1YPR005C UBP5P39944 805 aa6.12□□□□□ -1.43
HAL1YPR005C ARF3P40994 183 aaRIP-Chip data6.12□□□□□ -1.43not detected
HAL1YPR005C FKH2P41813 862 aa6.12□□□□□ -1.43
HAL1YPR005C CIR1P42940 261 aa6.12□□□□□ -1.43
HAL1YPR005C DUO1P53168 247 aaKnown RBP6.12□□□□□ -1.43
HAL1YPR005C REG1Q00816 1014 aa6.12□□□□□ -1.43
HAL1YPR005C CLU1Q03690 1277 aaKnown RBP6.12□□□□□ -1.43
HAL1YPR005C RCO1Q04779 684 aa6.12□□□□□ -1.43
HAL1YPR005C HOF1Q05080 669 aa6.12□□□□□ -1.43
HAL1YPR005C YLR224WQ05947 369 aa6.12□□□□□ -1.43
HAL1YPR005C VAM6Q07468 1049 aa6.12□□□□□ -1.43
HAL1YPR005C AIM6Q07716 390 aa6.12□□□□□ -1.43
HAL1YPR005C RPL19AP0CX82 189 aaKnown RBP6.11□□□□□ -1.43
HAL1YPR005C RPL19BP0CX83 189 aaPredicted RBP6.11□□□□□ -1.43
HAL1YPR005C VPS33P20795 691 aa6.11□□□□□ -1.43
HAL1YPR005C KAR4P25583 335 aa6.11□□□□□ -1.43
HAL1YPR005C FEN2P25621 512 aaKnown RBP6.11□□□□□ -1.43
HAL1YPR005C FMO1P38866 432 aa6.11□□□□□ -1.43
HAL1YPR005C UTP9P38882 575 aaKnown RBP6.11□□□□□ -1.43
HAL1YPR005C PLB1P39105 664 aa6.11□□□□□ -1.43
HAL1YPR005C YJL193WP39542 402 aa6.11□□□□□ -1.43
HAL1YPR005C NUP60P39705 539 aa6.11□□□□□ -1.43
HAL1YPR005C YEL025CP39991 1188 aa6.11□□□□□ -1.43
HAL1YPR005C TPA1P40032 644 aaKnown RBP6.11□□□□□ -1.43
HAL1YPR005C GPD2P41911 440 aaKnown RBP6.11□□□□□ -1.43
HAL1YPR005C RIM8P53179 542 aa6.11□□□□□ -1.43
HAL1YPR005C CSL4P53859 292 aaPredicted RBP6.11□□□□□ -1.43
HAL1YPR005C YSA1Q01976 231 aa6.11□□□□□ -1.43
HAL1YPR005C YFT2Q06676 274 aa6.11□□□□□ -1.43
HAL1YPR005C YBR126W-AQ8TGU7 68 aa6.11□□□□□ -1.43
HAL1YPR005C TUB2P02557 457 aaKnown RBP6.1□□□□□ -1.43
HAL1YPR005C SEC53P07283 254 aaKnown RBP6.1□□□□□ -1.43
HAL1YPR005C RPB2P08518 1224 aaKnown RBP6.1□□□□□ -1.43
HAL1YPR005C LAT1P12695 482 aaKnown RBP6.1□□□□□ -1.43
HAL1YPR005C PRE8P23639 250 aa6.1□□□□□ -1.43
HAL1YPR005C DCG1P32460 244 aa6.1□□□□□ -1.43
HAL1YPR005C YIR042CP40586 236 aa6.1□□□□□ -1.43
HAL1YPR005C SKP2P42843 763 aa6.1□□□□□ -1.43
HAL1YPR005C SIP4P46954 829 aa6.1□□□□□ -1.43
HAL1YPR005C IDS2P46958 469 aa6.1□□□□□ -1.43
HAL1YPR005C TAM41P53230 385 aa6.1□□□□□ -1.43
HAL1YPR005C ARE2P53629 642 aaKnown RBP6.1□□□□□ -1.43
HAL1YPR005C RPT6Q01939 405 aaKnown RBP6.1□□□□□ -1.43
HAL1YPR005C SUL2Q12325 893 aa6.1□□□□□ -1.43
HAL1YPR005C ATP2P00830 511 aaKnown RBP6.09□□□□□ -1.43
HAL1YPR005C GAS1P22146 559 aaKnown RBP6.09□□□□□ -1.43
HAL1YPR005C YCR015CP25616 317 aa6.09□□□□□ -1.43
HAL1YPR005C PRE2P30656 287 aaKnown RBP6.09□□□□□ -1.43
HAL1YPR005C MVD1P32377 396 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms