RNA–Protein interactions for RNA: YPL154C

PEP4, Transcript of Vacuolar aspartyl protease (proteinase A), yeast

Gene PEP4, Length 1,218 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP4	YPL154C	MED6	P38782	295 aa		4.93	□□□□□ -1.62
PEP4	YPL154C	STT3	P39007	718 aa	Known RBP	4.93	□□□□□ -1.62
PEP4	YPL154C	POL31	P46957	487 aa		4.93	□□□□□ -1.62
PEP4	YPL154C	PGA2	P53903	129 aa		4.93	□□□□□ -1.62
PEP4	YPL154C	TRS130	Q03660	1102 aa		4.93	□□□□□ -1.62
PEP4	YPL154C	SPP382	Q06411	708 aa	Predicted RBP	4.93	□□□□□ -1.62
PEP4	YPL154C	TMA46	Q12000	345 aa	Known RBP	4.93	□□□□□ -1.62
PEP4	YPL154C	SMC6	Q12749	1114 aa		4.93	□□□□□ -1.62
PEP4	YPL154C	POL2	P21951	2222 aa	Known RBP	4.92	□□□□□ -1.62
PEP4	YPL154C	MATALPHA2	P0CY08	210 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	HMLALPHA2	P0CY09	210 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	CBP3	P21560	335 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	SIR1	P21691	654 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	VPS3	P23643	1011 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	CSE1	P33307	960 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	GGA2	P38817	585 aa	Known RBP	4.92	□□□□□ -1.62
PEP4	YPL154C	BTT1	P40314	149 aa	Predicted RBP	4.92	□□□□□ -1.62
PEP4	YPL154C	MND2	P40577	368 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	CHS6	P40955	746 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	IES1	P43579	692 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	STB4	P50104	949 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	CWC21	Q03375	135 aa	Known RBP	4.92	□□□□□ -1.62
PEP4	YPL154C	JIP5	Q06214	492 aa	Predicted RBP	4.92	□□□□□ -1.62
PEP4	YPL154C	YLH47	Q06493	454 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	XYL2	Q07993	356 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	NOP12	Q08208	459 aa	Known RBP	4.92	□□□□□ -1.62
PEP4	YPL154C	TIP41	Q12199	356 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	CTF3	Q12748	733 aa		4.92	□□□□□ -1.62
PEP4	YPL154C	PMI40	P29952	429 aa	Known RBP	4.91	□□□□□ -1.62
PEP4	YPL154C	RAD16	P31244	790 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	LYP1	P32487	611 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	BRN1	P38170	754 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	YHR054C	P38780	354 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	RPN10	P38886	268 aa	Known RBP	4.91	□□□□□ -1.62
PEP4	YPL154C	PLB1	P39105	664 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	NUP82	P40368	713 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	ULP2	P40537	1034 aa	Predicted RBP	4.91	□□□□□ -1.62
PEP4	YPL154C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PEP4	YPL154C	ARK1	P53974	638 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	VTC3	Q02725	835 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	CUR1	Q06469	252 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	BSP1	Q06604	576 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	TPO1	Q07824	586 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	YPL066W	Q12194	479 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	TAD3	Q9URQ3	322 aa		4.91	□□□□□ -1.62
PEP4	YPL154C	HFA1	P32874	2273 aa		4.9	□□□□□ -1.62
PEP4	YPL154C	TPK1	P06244	397 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	CKA2	P19454	339 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	FPR1	P20081	114 aa	Known RBP	4.9	□□□□□ -1.63
PEP4	YPL154C	PPH22	P23595	377 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	PRR1	P28708	518 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	HEM3	P28789	327 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	DCG1	P32460	244 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	YSC83	P32792	385 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	MNN4	P36044	1178 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	TIF5	P38431	405 aa	Known RBP	4.9	□□□□□ -1.63
PEP4	YPL154C	SIP3	P38717	1229 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	ERC1	P38767	581 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	ZRG8	P40021	1076 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	DOT6	P40059	670 aa	Known RBP	4.9	□□□□□ -1.63
PEP4	YPL154C	EPL1	P43572	832 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	VTC2	P43585	828 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	RIP-Chip
PEP4	YPL154C	YGR153W	P48238	217 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	YKE2	P52553	114 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	UTP8	P53276	713 aa	Known RBP	4.9	□□□□□ -1.63
PEP4	YPL154C	YDL057W	Q07379	328 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	ADY3	Q07732	790 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	YPQ1	Q12010	308 aa		4.9	□□□□□ -1.63
PEP4	YPL154C	SSB1	P11484	613 aa	Known RBP	4.89	□□□□□ -1.63
PEP4	YPL154C	YKR051W	P36142	418 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	SSB2	P40150	613 aa	Known RBP	4.89	□□□□□ -1.63
PEP4	YPL154C	RMD8	P43620	662 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	MET12	P46151	657 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	ORC5	P50874	479 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	CUE3	P53137	624 aa	Known RBP	4.89	□□□□□ -1.63
PEP4	YPL154C	TYW3	P53177	273 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	CBK1	P53894	756 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	HER2	Q03557	464 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	SHS1	Q07657	551 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	TAF10	Q12030	206 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	SGT2	Q12118	346 aa	Known RBP	4.89	□□□□□ -1.63
PEP4	YPL154C	HRT3	Q12347	344 aa		4.89	□□□□□ -1.63
PEP4	YPL154C	RPL4A	P10664	362 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	INO1	P11986	533 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	ENA1	P13587	1091 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	FRS2	P15625	503 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	VPS1	P21576	704 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PEP4	YPL154C	SWE1	P32944	819 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	KDX1	P36005	433 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	TCD2	P36101	447 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	PIH1	P38768	344 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	YER158C	P40095	573 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	ASN1	P49089	572 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	RPL4B	P49626	362 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	NMA2	P53204	395 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	SDA1	P53313	767 aa	Known RBP	4.88	□□□□□ -1.63
PEP4	YPL154C	ENA2	Q01896	1091 aa		4.88	□□□□□ -1.63
PEP4	YPL154C	SNU56	Q03782	492 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms