RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C CUE5Q08412 411 aaKnown RBP9.87□□□□□ -0.83
SSN3YPL042C RIF1P29539 1916 aa9.87□□□□□ -0.83
SSN3YPL042C COX4P04037 155 aa9.87□□□□□ -0.83
SSN3YPL042C RAD3P06839 778 aa9.87□□□□□ -0.83
SSN3YPL042C SEC21P32074 935 aaKnown RBP9.87□□□□□ -0.83
SSN3YPL042C CBF2P32504 956 aa9.87□□□□□ -0.83
SSN3YPL042C MRP4P32902 394 aa9.87□□□□□ -0.83
SSN3YPL042C DUR3P33413 735 aa9.87□□□□□ -0.83
SSN3YPL042C MPH1P40562 993 aa9.87□□□□□ -0.83
SSN3YPL042C REF2P42073 533 aaPredicted RBP9.87□□□□□ -0.83
SSN3YPL042C MIG2P53035 382 aa9.87□□□□□ -0.83
SSN3YPL042C YNR063WP53749 607 aa9.87□□□□□ -0.83
SSN3YPL042C IST1P53843 298 aaPredicted RBP9.87□□□□□ -0.83
SSN3YPL042C RSC3Q06639 885 aa9.87□□□□□ -0.83
SSN3YPL042C RPS3P05750 240 aaKnown RBP9.86□□□□□ -0.83
SSN3YPL042C ERG11P10614 530 aa9.86□□□□□ -0.83
SSN3YPL042C CLN2P20438 545 aa9.86□□□□□ -0.83
SSN3YPL042C SCJ1P25303 377 aa9.86□□□□□ -0.83
SSN3YPL042C DAL2P25335 343 aa9.86□□□□□ -0.83
SSN3YPL042C LYP1P32487 611 aa9.86□□□□□ -0.83
SSN3YPL042C CSG2P35206 410 aa9.86□□□□□ -0.83
SSN3YPL042C EXO5P38289 585 aa9.86□□□□□ -0.83
SSN3YPL042C YMR1P47147 688 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
SSN3YPL042C RNR4P49723 345 aaKnown RBP9.86□□□□□ -0.83
SSN3YPL042C YDR131CQ03899 556 aa9.86□□□□□ -0.83
SSN3YPL042C SFI1Q12369 946 aa9.86□□□□□ -0.83
SSN3YPL042C CYT1P07143 309 aa9.85□□□□□ -0.83
SSN3YPL042C ASP3-2P0CX77 362 aa9.85□□□□□ -0.83
SSN3YPL042C ASP3-3P0CX78 362 aa9.85□□□□□ -0.83
SSN3YPL042C ASP3-4P0CX79 362 aa9.85□□□□□ -0.83
SSN3YPL042C ASP3-1P0CZ17 362 aa9.85□□□□□ -0.83
SSN3YPL042C RPL4AP10664 362 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C GLN3P18494 730 aa9.85□□□□□ -0.83
SSN3YPL042C COX11P19516 300 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C PWP1P21304 576 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C TPS2P31688 896 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C DOM34P33309 386 aa9.85□□□□□ -0.83
SSN3YPL042C FTH1P38310 465 aa9.85□□□□□ -0.83
SSN3YPL042C RPL4BP49626 362 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C AZR1P50080 613 aa9.85□□□□□ -0.83
SSN3YPL042C VPS62P53285 467 aa9.85□□□□□ -0.83
SSN3YPL042C ERV25P54837 211 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C CEG1Q01159 459 aaPredicted RBP9.85□□□□□ -0.83
SSN3YPL042C STE20Q03497 939 aaKnown RBP9.85□□□□□ -0.83
SSN3YPL042C APA1P16550 321 aaKnown RBP9.84□□□□□ -0.83
SSN3YPL042C FUR1P18562 216 aaKnown RBP9.84□□□□□ -0.83
SSN3YPL042C DMC1P25453 334 aa9.84□□□□□ -0.83
SSN3YPL042C PAH1P32567 862 aa9.84□□□□□ -0.83
SSN3YPL042C TRM2P33753 639 aa9.84□□□□□ -0.83
SSN3YPL042C CCZ1P38273 704 aa9.84□□□□□ -0.83
SSN3YPL042C SMF1P38925 575 aa9.84□□□□□ -0.83
SSN3YPL042C INA22P40576 216 aa9.84□□□□□ -0.83
SSN3YPL042C ULI1P43604 169 aa9.84□□□□□ -0.83
SSN3YPL042C MAL13P53338 473 aa9.84□□□□□ -0.83
SSN3YPL042C MET14Q02196 202 aa9.84□□□□□ -0.83
SSN3YPL042C MUK1Q02866 612 aa9.84□□□□□ -0.83
SSN3YPL042C DOT1Q04089 582 aaKnown RBP9.84□□□□□ -0.83
SSN3YPL042C ABP140Q08641 628 aaKnown RBP9.84□□□□□ -0.83
SSN3YPL042C AI5_BETAQ9ZZX0 354 aa9.84□□□□□ -0.83
SSN3YPL042C ENO1P00924 437 aaKnown RBP9.83□□□□□ -0.84
SSN3YPL042C ARG81P05085 880 aa9.83□□□□□ -0.84
SSN3YPL042C ADE2P21264 571 aaKnown RBP9.83□□□□□ -0.84
SSN3YPL042C RRT12P25381 491 aa9.83□□□□□ -0.84
SSN3YPL042C RPT1P33299 467 aaKnown RBP9.83□□□□□ -0.84
SSN3YPL042C RSM22P36056 628 aa9.83□□□□□ -0.84
SSN3YPL042C BCH2P36122 765 aa9.83□□□□□ -0.84
SSN3YPL042C RDH54P38086 958 aa9.83□□□□□ -0.84
SSN3YPL042C ALG14P38242 237 aa9.83□□□□□ -0.84
SSN3YPL042C DYS1P38791 387 aa9.83□□□□□ -0.84
SSN3YPL042C KAP114P53067 1004 aa9.83□□□□□ -0.84
SSN3YPL042C NOP15P53927 220 aaPredicted RBP9.83□□□□□ -0.84
SSN3YPL042C MUB1Q03162 620 aa9.83□□□□□ -0.84
SSN3YPL042C SPR28Q04921 423 aa9.83□□□□□ -0.84
SSN3YPL042C RNR1P21524 888 aaKnown RBP9.83□□□□□ -0.84
SSN3YPL042C VPS3P23643 1011 aa9.83□□□□□ -0.84
SSN3YPL042C PRR1P28708 518 aa9.83□□□□□ -0.84
SSN3YPL042C MET4P32389 672 aa9.83□□□□□ -0.84
SSN3YPL042C VPS17P32913 551 aa9.83□□□□□ -0.84
SSN3YPL042C AFR1P33304 620 aa9.83□□□□□ -0.84
SSN3YPL042C PTC4P38089 393 aa9.83□□□□□ -0.84
SSN3YPL042C YTA12P40341 825 aa9.83□□□□□ -0.84
SSN3YPL042C SBE2P42223 864 aaKnown RBP9.83□□□□□ -0.84
SSN3YPL042C ISM1P48526 1002 aa9.83□□□□□ -0.84
SSN3YPL042C DRN1P53255 507 aaKnown RBP9.83□□□□□ -0.84
SSN3YPL042C YIG1Q08956 461 aa9.83□□□□□ -0.84
SSN3YPL042C ECM3Q99252 613 aa9.83□□□□□ -0.84
SSN3YPL042C ADE4P04046 510 aaKnown RBP9.82□□□□□ -0.84
SSN3YPL042C DOA4P32571 926 aa9.82□□□□□ -0.84
SSN3YPL042C DHR2P36009 735 aaPredicted RBP9.82□□□□□ -0.84
SSN3YPL042C YJR061WP40355 935 aa9.82□□□□□ -0.84
SSN3YPL042C PHO86P46956 311 aa9.82□□□□□ -0.84
SSN3YPL042C CCT8P47079 568 aaKnown RBP9.82□□□□□ -0.84
SSN3YPL042C RPM2Q02773 1202 aa9.82□□□□□ -0.84
SSN3YPL042C SCM3Q12334 223 aa9.82□□□□□ -0.84
SSN3YPL042C LAA1P39526 2014 aa9.82□□□□□ -0.84
SSN3YPL042C MIS1P09440 975 aaKnown RBP9.81□□□□□ -0.84
SSN3YPL042C VAN1P23642 535 aa9.81□□□□□ -0.84
SSN3YPL042C RCK2P38623 610 aa9.81□□□□□ -0.84
SSN3YPL042C YHR054CP38780 354 aa9.81□□□□□ -0.84
SSN3YPL042C RGA1P39083 1007 aa9.81□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms