RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W SPO21Q12411 609 aa6.88□□□□□ -1.31
LSC1YOR142W YLR462WO13556 202 aa6.87□□□□□ -1.31
LSC1YOR142W HIS1P00498 297 aaKnown RBP6.87□□□□□ -1.31
LSC1YOR142W FPR1P20081 114 aaKnown RBP6.87□□□□□ -1.31
LSC1YOR142W ADY2P25613 283 aa6.87□□□□□ -1.31
LSC1YOR142W MSH2P25847 964 aa6.87□□□□□ -1.31
LSC1YOR142W MEI4P29467 408 aa6.87□□□□□ -1.31
LSC1YOR142W KAP104P38217 918 aaKnown RBP6.87□□□□□ -1.31
LSC1YOR142W YHL049CP38722 271 aa6.87□□□□□ -1.31
LSC1YOR142W FLC2P39719 783 aa6.87□□□□□ -1.31
LSC1YOR142W YFL064CP43540 174 aa6.87□□□□□ -1.31
LSC1YOR142W ALY2P47029 1046 aa6.87□□□□□ -1.31
LSC1YOR142W BOP3P53958 396 aa6.87□□□□□ -1.31
LSC1YOR142W ADI1Q03677 179 aa6.87□□□□□ -1.31
LSC1YOR142W PEX15Q08215 383 aa6.87□□□□□ -1.31
LSC1YOR142W YBL111CQ3E7Y5 667 aa6.87□□□□□ -1.31
LSC1YOR142W MSB2P32334 1306 aa6.86□□□□□ -1.31
LSC1YOR142W MSF1P08425 469 aa6.86□□□□□ -1.31
LSC1YOR142W PDR1P12383 1068 aa6.86□□□□□ -1.31
LSC1YOR142W CKI1P20485 582 aa6.86□□□□□ -1.31
LSC1YOR142W SAW1P39735 261 aa6.86□□□□□ -1.31
LSC1YOR142W EXO1P39875 702 aa6.86□□□□□ -1.31
LSC1YOR142W MKT1P40850 830 aaKnown RBP6.86□□□□□ -1.31
LSC1YOR142W AMA1P50082 593 aa6.86□□□□□ -1.31
LSC1YOR142W NRD1P53617 575 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
LSC1YOR142W YNL247WP53852 767 aaKnown RBP6.86□□□□□ -1.31
LSC1YOR142W INP2Q03824 705 aa6.86□□□□□ -1.31
LSC1YOR142W GRX8Q05926 109 aa6.86□□□□□ -1.31
LSC1YOR142W THI7Q05998 598 aa6.86□□□□□ -1.31
LSC1YOR142W YLR012CQ07927 99 aa6.86□□□□□ -1.31
LSC1YOR142W RSB1Q08417 382 aa6.86□□□□□ -1.31
LSC1YOR142W GPM3Q12326 303 aa6.86□□□□□ -1.31
LSC1YOR142W RPS9AO13516 197 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W HOM2P13663 365 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W SEC63P14906 663 aa6.85□□□□□ -1.31
LSC1YOR142W SFL1P20134 766 aa6.85□□□□□ -1.31
LSC1YOR142W PCA1P38360 1216 aa6.85□□□□□ -1.31
LSC1YOR142W SOL3P38858 249 aa6.85□□□□□ -1.31
LSC1YOR142W AIM18P38884 321 aa6.85□□□□□ -1.31
LSC1YOR142W VAC8P39968 578 aa6.85□□□□□ -1.31
LSC1YOR142W YEL028WP39989 153 aa6.85□□□□□ -1.31
LSC1YOR142W ATM1P40416 690 aa6.85□□□□□ -1.31
LSC1YOR142W RPS10BP46784 105 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W RSM26P47141 266 aa6.85□□□□□ -1.31
LSC1YOR142W ASN2P49090 572 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W APT1P49435 187 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W FLC3P53121 802 aa6.85□□□□□ -1.31
LSC1YOR142W YNR063WP53749 607 aa6.85□□□□□ -1.31
LSC1YOR142W NIS1P53939 407 aa6.85□□□□□ -1.31
LSC1YOR142W YMR114CQ04471 368 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W YSH1Q06224 779 aaPredicted RBP6.85□□□□□ -1.31
LSC1YOR142W RPS10AQ08745 105 aaPredicted RBP6.85□□□□□ -1.31
LSC1YOR142W YLR046CQ12253 270 aa6.85□□□□□ -1.31
LSC1YOR142W AIR2Q12476 344 aaKnown RBP6.85□□□□□ -1.31
LSC1YOR142W CAN1P04817 590 aa6.84□□□□□ -1.31
LSC1YOR142W TUB3P09734 445 aaKnown RBP6.84□□□□□ -1.31
LSC1YOR142W PMS1P14242 873 aa6.84□□□□□ -1.31
LSC1YOR142W PET123P17558 318 aa6.84□□□□□ -1.31
LSC1YOR142W GEX1P25596 615 aa6.84□□□□□ -1.31
LSC1YOR142W PAP1P29468 568 aaKnown RBP6.84□□□□□ -1.31
LSC1YOR142W STE13P33894 931 aa6.84□□□□□ -1.31
LSC1YOR142W GEX2P36173 615 aa6.84□□□□□ -1.31
LSC1YOR142W BIT2P38346 545 aa6.84□□□□□ -1.31
LSC1YOR142W PPE1P38796 400 aa6.84□□□□□ -1.31
LSC1YOR142W END3P39013 349 aa6.84□□□□□ -1.31
LSC1YOR142W STL1P39932 569 aa6.84□□□□□ -1.31
LSC1YOR142W OSW5P40219 148 aa6.84□□□□□ -1.31
LSC1YOR142W ARG2P40360 574 aa6.84□□□□□ -1.31
LSC1YOR142W RFX1P48743 811 aa6.84□□□□□ -1.31
LSC1YOR142W PYK2P52489 506 aaKnown RBP6.84□□□□□ -1.31
LSC1YOR142W YGR127WP53275 312 aa6.84□□□□□ -1.31
LSC1YOR142W PIR1Q03178 341 aa6.84□□□□□ -1.31
LSC1YOR142W VAC14Q06708 880 aa6.84□□□□□ -1.31
LSC1YOR142W YDL073WQ07454 984 aa6.84□□□□□ -1.31
LSC1YOR142W TPO1Q07824 586 aa6.84□□□□□ -1.31
LSC1YOR142W PER33Q12144 273 aa6.84□□□□□ -1.31
LSC1YOR142W YDR018CQ12185 396 aa6.84□□□□□ -1.31
LSC1YOR142W OCA6Q12454 224 aa6.84□□□□□ -1.31
LSC1YOR142W AFI1Q99222 893 aa6.84□□□□□ -1.31
LSC1YOR142W ENO1P00924 437 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W SLY1P22213 666 aa6.83□□□□□ -1.32
LSC1YOR142W YJU3P28321 313 aa6.83□□□□□ -1.32
LSC1YOR142W KAR9P32526 644 aa6.83□□□□□ -1.32
LSC1YOR142W SRB4P32569 687 aa6.83□□□□□ -1.32
LSC1YOR142W RTG1P32607 177 aa6.83□□□□□ -1.32
LSC1YOR142W CRP1P38845 465 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W FMO1P38866 432 aa6.83□□□□□ -1.32
LSC1YOR142W CAJ1P39101 391 aa6.83□□□□□ -1.32
LSC1YOR142W MVP1P40959 511 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W DLD2P46681 530 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W MNN11P46985 422 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
LSC1YOR142W TRF5P48561 642 aaKnown RBP6.83□□□□□ -1.32
LSC1YOR142W YML6P51998 286 aa6.83□□□□□ -1.32
LSC1YOR142W RIM8P53179 542 aa6.83□□□□□ -1.32
LSC1YOR142W CAF120P53836 1060 aa6.83□□□□□ -1.32
LSC1YOR142W TDA7P53882 636 aaPredicted RBP6.83□□□□□ -1.32
LSC1YOR142W NMA111P53920 997 aa6.83□□□□□ -1.32
LSC1YOR142W VPS9P54787 451 aa6.83□□□□□ -1.32
LSC1YOR142W DOS2P54858 310 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms