RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	THI6	P41835	540 aa		6.28	□□□□□ -1.4
RSA3	YLR221C	ADE3	P07245	946 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	NCP1	P16603	691 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	YPT53	P36019	220 aa		6.27	□□□□□ -1.41
RSA3	YLR221C	MRPL7	P36519	292 aa		6.27	□□□□□ -1.41
RSA3	YLR221C	FSH1	P38777	243 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	KAP123	P40069	1113 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	IDS2	P46958	469 aa		6.27	□□□□□ -1.41
RSA3	YLR221C	DAK1	P54838	584 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	ATG21	Q02887	496 aa		6.27	□□□□□ -1.41
RSA3	YLR221C	EFR3	Q03653	782 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	UFO1	Q04511	668 aa		6.27	□□□□□ -1.41
RSA3	YLR221C	BMS1	Q08965	1183 aa	Known RBP	6.27	□□□□□ -1.41
RSA3	YLR221C	UBC1	P21734	215 aa	Known RBP	6.26	□□□□□ -1.41
RSA3	YLR221C	RER1	P25560	188 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	RPS7A	P26786	190 aa	Known RBP	6.26	□□□□□ -1.41
RSA3	YLR221C	SET3	P36124	751 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	CBR1	P38626	284 aa	Known RBP	6.26	□□□□□ -1.41
RSA3	YLR221C	PCL5	P38794	229 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	YHR097C	P38809	366 aa	Known RBP	6.26	□□□□□ -1.41
RSA3	YLR221C	NDC80	P40460	691 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	DIP5	P53388	608 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	SMX3	P54999	86 aa	Predicted RBP	6.26	□□□□□ -1.41
RSA3	YLR221C	YMR018W	Q04364	514 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	HOF1	Q05080	669 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	NEW1	Q08972	1196 aa	Known RBP	6.26	□□□□□ -1.41
RSA3	YLR221C	RKI1	Q12189	258 aa		6.26	□□□□□ -1.41
RSA3	YLR221C	BIK1	P11709	440 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	BET2	P20133	325 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	SWI4	P25302	1093 aa	Known RBP	6.25	□□□□□ -1.41
RSA3	YLR221C	RPT3	P33298	428 aa	Known RBP	6.25	□□□□□ -1.41
RSA3	YLR221C	YBR138C	P38277	524 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	KSP1	P38691	1029 aa	Known RBP	6.25	□□□□□ -1.41
RSA3	YLR221C	STB5	P38699	743 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	CTR1	P49573	406 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	COS12	P53053	380 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	MFM1	Q02783	413 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	ACF2	Q12168	779 aa		6.25	□□□□□ -1.41
RSA3	YLR221C	SWC3	P31376	625 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	SLC1	P33333	303 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	RRN3	P36070	627 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	UME6	P39001	836 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	SAP4	P53036	818 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	TIM44	Q01852	431 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	CSR1	Q06705	408 aa	Known RBP	6.24	□□□□□ -1.41
RSA3	YLR221C	AIM6	Q07716	390 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	YPL216W	Q08964	1102 aa		6.24	□□□□□ -1.41
RSA3	YLR221C	RAD16	P31244	790 aa		6.23	□□□□□ -1.41
RSA3	YLR221C	ARP2	P32381	391 aa	Known RBP	6.23	□□□□□ -1.41
RSA3	YLR221C	NMA2	P53204	395 aa		6.23	□□□□□ -1.41
RSA3	YLR221C	SNF12	P53628	566 aa		6.23	□□□□□ -1.41
RSA3	YLR221C	YPL108W	Q02872	168 aa	Predicted RBP	6.23	□□□□□ -1.41
RSA3	YLR221C	HBT1	Q07653	1046 aa	Known RBP	6.23	□□□□□ -1.41
RSA3	YLR221C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
RSA3	YLR221C	PRE2	P30656	287 aa	Known RBP	6.22	□□□□□ -1.41
RSA3	YLR221C	LOT5	P34234	306 aa		6.22	□□□□□ -1.41
RSA3	YLR221C	GLG1	P36143	616 aa		6.22	□□□□□ -1.41
RSA3	YLR221C	BST1	P43571	1029 aa		6.22	□□□□□ -1.41
RSA3	YLR221C	CTF18	P49956	741 aa		6.22	□□□□□ -1.41
RSA3	YLR221C	USA1	Q03714	838 aa		6.22	□□□□□ -1.41
RSA3	YLR221C	LEU2	P04173	364 aa	Predicted RBP	6.21	□□□□□ -1.42
RSA3	YLR221C	GFD2	P25370	566 aa	Known RBP	6.21	□□□□□ -1.42
RSA3	YLR221C	MCM10	P32354	571 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	GMH1	P36125	273 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	CCL1	P37366	393 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	SDH8	P38345	138 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	BDH2	P39713	417 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	YIP4	P53093	235 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	ESF2	P53743	316 aa	Known RBP	6.21	□□□□□ -1.42
RSA3	YLR221C	YMR206W	Q03695	313 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	ICL2	Q12031	575 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	TGS1	Q12052	315 aa		6.21	□□□□□ -1.42
RSA3	YLR221C	PET122	P10355	254 aa		6.2	□□□□□ -1.42
RSA3	YLR221C	YCR061W	P25639	631 aa		6.2	□□□□□ -1.42
RSA3	YLR221C	GCD7	P32502	381 aa	Predicted RBP	6.2	□□□□□ -1.42
RSA3	YLR221C	BUD17	P53727	317 aa		6.2	□□□□□ -1.42
RSA3	YLR221C	NGL2	Q03264	515 aa	Known RBP	6.2	□□□□□ -1.42
RSA3	YLR221C	VID22	Q05934	901 aa		6.2	□□□□□ -1.42
RSA3	YLR221C	LAM4	P38800	1345 aa		6.2	□□□□□ -1.42
RSA3	YLR221C	SNF1	P06782	633 aa	Known RBP	6.19	□□□□□ -1.42
RSA3	YLR221C	CNE1	P27825	502 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	CHS3	P29465	1165 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	TEF4	P36008	412 aa	Known RBP	6.19	□□□□□ -1.42
RSA3	YLR221C	IFA38	P38286	347 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	PIH1	P38768	344 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	ARB1	P40024	610 aa	Known RBP	6.19	□□□□□ -1.42
RSA3	YLR221C	PMT6	P42934	759 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	BNA1	P47096	177 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	MUK1	Q02866	612 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	TFC6	Q06339	672 aa		6.19	□□□□□ -1.42
RSA3	YLR221C	TPK1	P06244	397 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	STE4	P18851	423 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	LNP1	P38878	278 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	SKP2	P42843	763 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	SPC98	P53540	846 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	RPS15	Q01855	142 aa	Known RBP	6.18	□□□□□ -1.42
RSA3	YLR221C	YML122C	Q03207	126 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	TRS23	Q03784	219 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	CRF1	Q04930	467 aa		6.18	□□□□□ -1.42
RSA3	YLR221C	YDL073W	Q07454	984 aa		6.18	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms