RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W AUS1Q08409 1394 aa3.65□□□□□ -1.82
SDH3YKL141W YMR084WA2P2R3 262 aa3.65□□□□□ -1.83
SDH3YKL141W RPS24AP0CX31 135 aaKnown RBP3.65□□□□□ -1.83
SDH3YKL141W RPS24BP0CX32 135 aaKnown RBP3.65□□□□□ -1.83
SDH3YKL141W HMG1P12683 1054 aa3.65□□□□□ -1.83
SDH3YKL141W IMG2P25642 146 aaPredicted RBP3.65□□□□□ -1.83
SDH3YKL141W IME2P32581 645 aa3.65□□□□□ -1.83
SDH3YKL141W BEM4P39011 633 aa3.65□□□□□ -1.83
SDH3YKL141W YIP4P53093 235 aa3.65□□□□□ -1.83
SDH3YKL141W AIM14P53109 570 aa3.65□□□□□ -1.83
SDH3YKL141W LSC1P53598 329 aaKnown RBP3.65□□□□□ -1.83
SDH3YKL141W YNL050CP53952 270 aa3.65□□□□□ -1.83
SDH3YKL141W ECM16Q04217 1267 aaKnown RBP3.65□□□□□ -1.83
SDH3YKL141W RTT109Q07794 436 aa3.65□□□□□ -1.83
SDH3YKL141W YOR131CQ12486 218 aa3.65□□□□□ -1.83
SDH3YKL141W DAL5P15365 543 aa3.64□□□□□ -1.83
SDH3YKL141W PRP22P24384 1145 aaKnown RBP3.64□□□□□ -1.83
SDH3YKL141W OPY1P38271 328 aa3.64□□□□□ -1.83
SDH3YKL141W CCT4P39078 528 aaKnown RBP3.64□□□□□ -1.83
SDH3YKL141W YJL043WP47053 257 aa3.64□□□□□ -1.83
SDH3YKL141W COQ6P53318 479 aa3.64□□□□□ -1.83
SDH3YKL141W GIS2P53849 153 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SDH3YKL141W YNL018CP53976 612 aa3.64□□□□□ -1.83
SDH3YKL141W IDP3P53982 420 aaKnown RBP3.64□□□□□ -1.83
SDH3YKL141W RCR2Q03446 210 aaKnown RBP3.64□□□□□ -1.83
SDH3YKL141W YDL073WQ07454 984 aa3.64□□□□□ -1.83
SDH3YKL141W DNF3Q12674 1656 aa3.64□□□□□ -1.83
SDH3YKL141W TMN3P40071 706 aa3.63□□□□□ -1.83
SDH3YKL141W BST1P43571 1029 aa3.63□□□□□ -1.83
SDH3YKL141W DSD1P53095 428 aa3.63□□□□□ -1.83
SDH3YKL141W EAF7P53911 425 aaKnown RBP3.63□□□□□ -1.83
SDH3YKL141W GIN4Q12263 1142 aa3.63□□□□□ -1.83
SDH3YKL141W SNF2P22082 1703 aa3.63□□□□□ -1.83
SDH3YKL141W TY1B-NL2Q99337 1749 aaKnown RBP3.62□□□□□ -1.83
SDH3YKL141W CLC1P17891 233 aa3.62□□□□□ -1.83
SDH3YKL141W URE2P23202 354 aaKnown RBP3.62□□□□□ -1.83
SDH3YKL141W PCL2P25693 308 aa3.62□□□□□ -1.83
SDH3YKL141W CNE1P27825 502 aa3.62□□□□□ -1.83
SDH3YKL141W YKR075CP36155 307 aa3.62□□□□□ -1.83
SDH3YKL141W PCM1P38628 557 aaKnown RBP3.62□□□□□ -1.83
SDH3YKL141W PPE1P38796 400 aa3.62□□□□□ -1.83
SDH3YKL141W MFM1Q02783 413 aa3.62□□□□□ -1.83
SDH3YKL141W CEF1Q03654 590 aaPredicted RBP3.62□□□□□ -1.83
SDH3YKL141W NUP53Q03790 475 aa3.62□□□□□ -1.83
SDH3YKL141W BSP1Q06604 576 aa3.62□□□□□ -1.83
SDH3YKL141W EDE1P34216 1381 aa3.62□□□□□ -1.83
SDH3YKL141W WHI2P12611 486 aa3.61□□□□□ -1.83
SDH3YKL141W YKU70P32807 602 aa3.61□□□□□ -1.83
SDH3YKL141W TIM23P32897 222 aa3.61□□□□□ -1.83
SDH3YKL141W GCS1P35197 352 aa3.61□□□□□ -1.83
SDH3YKL141W MAL31P38156 614 aa3.61□□□□□ -1.83
SDH3YKL141W EXO1P39875 702 aa3.61□□□□□ -1.83
SDH3YKL141W MAF1P41910 395 aa3.61□□□□□ -1.83
SDH3YKL141W FDC1Q03034 503 aa3.61□□□□□ -1.83
SDH3YKL141W EFR3Q03653 782 aaKnown RBP3.61□□□□□ -1.83
SDH3YKL141W CRC1Q12289 327 aa3.61□□□□□ -1.83
SDH3YKL141W YPR089WO13585 888 aa3.6□□□□□ -1.83
SDH3YKL141W RPS19AP07280 144 aaKnown RBP3.6□□□□□ -1.83
SDH3YKL141W RPS19BP07281 144 aaPredicted RBP3.6□□□□□ -1.83
SDH3YKL141W YAP1P19880 650 aaKnown RBP3.6□□□□□ -1.83
SDH3YKL141W IME1P21190 360 aa3.6□□□□□ -1.83
SDH3YKL141W GSY2P27472 705 aa3.6□□□□□ -1.83
SDH3YKL141W HSP104P31539 908 aaKnown RBP3.6□□□□□ -1.83
SDH3YKL141W MRPL7P36519 292 aa3.6□□□□□ -1.83
SDH3YKL141W PXA1P41909 870 aa3.6□□□□□ -1.83
SDH3YKL141W SPO1P53541 631 aa3.6□□□□□ -1.83
SDH3YKL141W YMR210WQ03649 449 aa3.6□□□□□ -1.83
SDH3YKL141W YPL216WQ08964 1102 aa3.6□□□□□ -1.83
SDH3YKL141W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SDH3YKL141W VPS24P36095 224 aaKnown RBP3.59□□□□□ -1.83
SDH3YKL141W YNG2P38806 282 aaKnown RBP3.59□□□□□ -1.83
SDH3YKL141W BUD8P41698 603 aa3.59□□□□□ -1.83
SDH3YKL141W BUD17P53727 317 aa3.59□□□□□ -1.83
SDH3YKL141W UGO1Q03327 502 aa3.59□□□□□ -1.83
SDH3YKL141W GFD1Q04839 188 aaKnown RBP3.59□□□□□ -1.83
SDH3YKL141W YLR407WQ06070 228 aa3.59□□□□□ -1.83
SDH3YKL141W SLM3Q12093 417 aa3.59□□□□□ -1.83
SDH3YKL141W RDL1Q12305 139 aaKnown RBP3.59□□□□□ -1.83
SDH3YKL141W PCT1P13259 424 aa3.58□□□□□ -1.84
SDH3YKL141W SFL1P20134 766 aa3.58□□□□□ -1.84
SDH3YKL141W MSH2P25847 964 aa3.58□□□□□ -1.84
SDH3YKL141W PEX6P33760 1030 aa3.58□□□□□ -1.84
SDH3YKL141W OPT1P40897 799 aa3.58□□□□□ -1.84
SDH3YKL141W YFL015CP43578 164 aa3.58□□□□□ -1.84
SDH3YKL141W YGR054WP53235 642 aaKnown RBP3.58□□□□□ -1.84
SDH3YKL141W YPS7Q06325 596 aa3.58□□□□□ -1.84
SDH3YKL141W YOL057WQ08225 711 aa3.58□□□□□ -1.84
SDH3YKL141W LSP1Q12230 341 aaKnown RBP3.58□□□□□ -1.84
SDH3YKL141W YLR111WQ12528 110 aa3.58□□□□□ -1.84
SDH3YKL141W LYS2P07702 1392 aa3.57□□□□□ -1.84
SDH3YKL141W RAD50P12753 1312 aa3.57□□□□□ -1.84
SDH3YKL141W ROX1P25042 368 aa3.57□□□□□ -1.84
SDH3YKL141W PRP45P28004 379 aaPredicted RBP3.57□□□□□ -1.84
SDH3YKL141W APC1P53886 1748 aa3.57□□□□□ -1.84
SDH3YKL141W PPN1Q04119 674 aa3.57□□□□□ -1.84
SDH3YKL141W CSI1Q04368 295 aa3.57□□□□□ -1.84
SDH3YKL141W MRPL1Q04599 285 aa3.57□□□□□ -1.84
SDH3YKL141W GCD7P32502 381 aaPredicted RBP3.56□□□□□ -1.84
SDH3YKL141W SRP40P32583 406 aaPredicted RBP3.56□□□□□ -1.84
SDH3YKL141W RFC1P38630 861 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms