RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W YNL092WP53934 400 aa3.03□□□□□ -1.92
HIT1YJR055W PTA1Q01329 785 aaPredicted RBP3.03□□□□□ -1.92
HIT1YJR055W BUD7Q08754 746 aa3.03□□□□□ -1.92
HIT1YJR055W PNO1Q99216 274 aaKnown RBP3.03□□□□□ -1.92
HIT1YJR055W YEL076C-AP0CX16 216 aa3.02□□□□□ -1.93
HIT1YJR055W YLR464WP0CX17 216 aa3.02□□□□□ -1.93
HIT1YJR055W COQ3P27680 312 aa3.02□□□□□ -1.93
HIT1YJR055W DSS4P32601 143 aa3.02□□□□□ -1.93
HIT1YJR055W RRP14P36080 434 aaKnown RBP3.02□□□□□ -1.93
HIT1YJR055W IMD2P38697 523 aaKnown RBP3.02□□□□□ -1.93
HIT1YJR055W YEL076CP39971 216 aa3.02□□□□□ -1.93
HIT1YJR055W IMD3P50095 523 aaKnown RBP3.02□□□□□ -1.93
HIT1YJR055W RAD33Q04231 177 aa3.02□□□□□ -1.93
HIT1YJR055W SNA4Q07549 140 aa3.02□□□□□ -1.93
HIT1YJR055W THI73Q07904 523 aa3.02□□□□□ -1.93
HIT1YJR055W CET1O13297 549 aaPredicted RBP3.01□□□□□ -1.93
HIT1YJR055W PCK1P10963 549 aa3.01□□□□□ -1.93
HIT1YJR055W BET2P20133 325 aa3.01□□□□□ -1.93
HIT1YJR055W MAK32P23060 363 aa3.01□□□□□ -1.93
HIT1YJR055W AIM17P23180 465 aaKnown RBP3.01□□□□□ -1.93
HIT1YJR055W DGR2P32330 852 aa3.01□□□□□ -1.93
HIT1YJR055W HXT4P32467 576 aa3.01□□□□□ -1.93
HIT1YJR055W CDC5P32562 705 aa3.01□□□□□ -1.93
HIT1YJR055W GDA1P32621 518 aa3.01□□□□□ -1.93
HIT1YJR055W MNN11P46985 422 aaKnown RBP3.01□□□□□ -1.93
HIT1YJR055W ALG12P53730 551 aa3.01□□□□□ -1.93
HIT1YJR055W DNM1P54861 757 aa3.01□□□□□ -1.93
HIT1YJR055W CRT10Q08226 957 aa3.01□□□□□ -1.93
HIT1YJR055W NDD1Q08887 554 aa3.01□□□□□ -1.93
HIT1YJR055W YTM1Q12024 460 aaPredicted RBP3.01□□□□□ -1.93
HIT1YJR055W ADR1P07248 1323 aa3□□□□□ -1.93
HIT1YJR055W DID4P36108 232 aa3□□□□□ -1.93
HIT1YJR055W FTH1P38310 465 aa3□□□□□ -1.93
HIT1YJR055W MDV1P47025 714 aa3□□□□□ -1.93
HIT1YJR055W HLJ1P48353 224 aa3□□□□□ -1.93
HIT1YJR055W PEF1P53238 335 aa3□□□□□ -1.93
HIT1YJR055W SQS1P53866 767 aaKnown RBP3□□□□□ -1.93
HIT1YJR055W SNU56Q03782 492 aaKnown RBP3□□□□□ -1.93
HIT1YJR055W GND1P38720 489 aaKnown RBP2.99□□□□□ -1.93
HIT1YJR055W FPR4Q06205 392 aaPredicted RBP2.99□□□□□ -1.93
HIT1YJR055W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
HIT1YJR055W YOR111WQ99210 232 aa2.99□□□□□ -1.93
HIT1YJR055W YTA7P40340 1379 aa2.99□□□□□ -1.93
HIT1YJR055W GAL4P04386 881 aa2.98□□□□□ -1.93
HIT1YJR055W SEC12P11655 471 aa2.98□□□□□ -1.93
HIT1YJR055W RPT3P33298 428 aaKnown RBP2.98□□□□□ -1.93
HIT1YJR055W SDH8P38345 138 aa2.98□□□□□ -1.93
HIT1YJR055W YIR016WP40572 265 aa2.98□□□□□ -1.93
HIT1YJR055W CIN1P40987 1014 aa2.98□□□□□ -1.93
HIT1YJR055W MTD1Q02046 320 aaKnown RBP2.98□□□□□ -1.93
HIT1YJR055W NGL1Q08213 363 aaKnown RBP2.98□□□□□ -1.93
HIT1YJR055W Q0010Q9ZZX9 128 aa2.98□□□□□ -1.93
HIT1YJR055W MTG2P38860 518 aa2.97□□□□□ -1.93
HIT1YJR055W MNN1P39106 762 aa2.97□□□□□ -1.93
HIT1YJR055W YIL152WP40455 235 aa2.97□□□□□ -1.93
HIT1YJR055W YNL058CP53947 316 aa2.97□□□□□ -1.93
HIT1YJR055W ATX2Q12067 313 aa2.97□□□□□ -1.93
HIT1YJR055W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
HIT1YJR055W CBP3P21560 335 aa2.96□□□□□ -1.94
HIT1YJR055W ATP12P22135 325 aa2.96□□□□□ -1.94
HIT1YJR055W AEP2P22136 580 aa2.96□□□□□ -1.94
HIT1YJR055W RRP43P25359 394 aaPredicted RBP2.96□□□□□ -1.94
HIT1YJR055W YCR043CP25361 127 aa2.96□□□□□ -1.94
HIT1YJR055W PPG1P32838 368 aa2.96□□□□□ -1.94
HIT1YJR055W CIR1P42940 261 aa2.96□□□□□ -1.94
HIT1YJR055W RNH70P53331 553 aa2.96□□□□□ -1.94
HIT1YJR055W BOP3P53958 396 aa2.96□□□□□ -1.94
HIT1YJR055W UME1Q03010 460 aa2.96□□□□□ -1.94
HIT1YJR055W YML119WQ03208 357 aa2.96□□□□□ -1.94
HIT1YJR055W UBX3Q12229 455 aa2.96□□□□□ -1.94
HIT1YJR055W RTC1Q08281 1341 aa2.95□□□□□ -1.94
HIT1YJR055W CHO2P05374 869 aaKnown RBP2.95□□□□□ -1.94
HIT1YJR055W ILS1P09436 1072 aaKnown RBP2.95□□□□□ -1.94
HIT1YJR055W AMD2P22580 549 aa2.95□□□□□ -1.94
HIT1YJR055W CWH43P25618 953 aa2.95□□□□□ -1.94
HIT1YJR055W SER1P33330 395 aaKnown RBP2.95□□□□□ -1.94
HIT1YJR055W GPP1P41277 250 aaKnown RBP2.95□□□□□ -1.94
HIT1YJR055W RNR4P49723 345 aaKnown RBP2.95□□□□□ -1.94
HIT1YJR055W GPG1P53130 126 aa2.95□□□□□ -1.94
HIT1YJR055W COG2P53271 262 aa2.95□□□□□ -1.94
HIT1YJR055W YTH1Q06102 208 aaPredicted RBP2.95□□□□□ -1.94
HIT1YJR055W RAD34Q06665 692 aa2.95□□□□□ -1.94
HIT1YJR055W GET3Q12154 354 aaKnown RBP2.95□□□□□ -1.94
HIT1YJR055W KES1P35844 434 aaKnown RBP2.94□□□□□ -1.94
HIT1YJR055W SRP68P38687 599 aaKnown RBP2.94□□□□□ -1.94
HIT1YJR055W TOM71P38825 639 aaKnown RBP2.94□□□□□ -1.94
HIT1YJR055W VPS8P39702 1274 aa2.94□□□□□ -1.94
HIT1YJR055W LAS21P40367 830 aa2.94□□□□□ -1.94
HIT1YJR055W TES1P41903 349 aaKnown RBP2.94□□□□□ -1.94
HIT1YJR055W IRC5P43610 853 aa2.94□□□□□ -1.94
HIT1YJR055W PMT3P47190 753 aa2.94□□□□□ -1.94
HIT1YJR055W COS12P53053 380 aa2.94□□□□□ -1.94
HIT1YJR055W DSE3Q08729 430 aa2.94□□□□□ -1.94
HIT1YJR055W PFA4Q12006 378 aa2.94□□□□□ -1.94
HIT1YJR055W LYS21Q12122 440 aaKnown RBP2.94□□□□□ -1.94
HIT1YJR055W LCB4Q12246 624 aa2.94□□□□□ -1.94
HIT1YJR055W VPS5Q92331 675 aa2.94□□□□□ -1.94
HIT1YJR055W PLC1P32383 869 aa2.93□□□□□ -1.94
HIT1YJR055W ARC40P38328 384 aaKnown RBP2.93□□□□□ -1.94
HIT1YJR055W SAP1P39955 897 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms