RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W SPO71Q03868 1245 aa8.11□□□□□ -1.11
YRF1-3YGR296W DUS4Q06063 367 aa8.11□□□□□ -1.11
YRF1-3YGR296W TRE2Q08693 809 aa8.11□□□□□ -1.11
YRF1-3YGR296W PEX31P53203 462 aa8.11□□□□□ -1.11
YRF1-3YGR296W YNL108CP53929 270 aa8.11□□□□□ -1.11
YRF1-3YGR296W THI7Q05998 598 aa8.11□□□□□ -1.11
YRF1-3YGR296W DPH2P32461 534 aa8.11□□□□□ -1.11
YRF1-3YGR296W IXR1P33417 597 aa8.11□□□□□ -1.11
YRF1-3YGR296W EFM1P38732 585 aa8.11□□□□□ -1.11
YRF1-3YGR296W TAF9Q05027 157 aa8.11□□□□□ -1.11
YRF1-3YGR296W OPT2Q06593 877 aa8.11□□□□□ -1.11
YRF1-3YGR296W ADY2P25613 283 aa8.11□□□□□ -1.11
YRF1-3YGR296W SHP1P34223 423 aa8.11□□□□□ -1.11
YRF1-3YGR296W NDT80P38830 627 aa8.11□□□□□ -1.11
YRF1-3YGR296W LYS9P38999 446 aa8.11□□□□□ -1.11
YRF1-3YGR296W MDV1P47025 714 aa8.11□□□□□ -1.11
YRF1-3YGR296W YNL146WP53906 100 aa8.11□□□□□ -1.11
YRF1-3YGR296W YNL010WP53981 241 aaKnown RBP8.11□□□□□ -1.11
YRF1-3YGR296W DPB4Q04603 196 aaKnown RBP8.11□□□□□ -1.11
YRF1-3YGR296W GVP36P40531 326 aaKnown RBP8.11□□□□□ -1.11
YRF1-3YGR296W ARF3P40994 183 aaRIP-Chip data8.11□□□□□ -1.11not detected
YRF1-3YGR296W TMN3P40071 706 aa8.1□□□□□ -1.11
YRF1-3YGR296W LIA1P47120 325 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W MAL11P53048 616 aa8.1□□□□□ -1.11
YRF1-3YGR296W NSE5Q03718 556 aa8.1□□□□□ -1.11
YRF1-3YGR296W TAF12Q03761 539 aa8.1□□□□□ -1.11
YRF1-3YGR296W IES4Q08561 116 aa8.1□□□□□ -1.11
YRF1-3YGR296W GAP1P19145 602 aaPredicted RBP8.1□□□□□ -1.11
YRF1-3YGR296W ARG1P22768 420 aa8.1□□□□□ -1.11
YRF1-3YGR296W DCC1P25559 380 aa8.1□□□□□ -1.11
YRF1-3YGR296W SPB1P25582 841 aaPredicted RBP8.1□□□□□ -1.11
YRF1-3YGR296W GAC1P28006 793 aa8.1□□□□□ -1.11
YRF1-3YGR296W BEM3P32873 1128 aa8.1□□□□□ -1.11
YRF1-3YGR296W PRM9P39551 298 aa8.1□□□□□ -1.11
YRF1-3YGR296W RSC8P43609 557 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W CUS2P53830 285 aaPredicted RBP8.1□□□□□ -1.11
YRF1-3YGR296W YNL140CP53910 189 aa8.1□□□□□ -1.11
YRF1-3YGR296W YMR102CQ03177 834 aa8.1□□□□□ -1.11
YRF1-3YGR296W SPC2Q04969 178 aa8.1□□□□□ -1.11
YRF1-3YGR296W NCA2Q12374 616 aa8.1□□□□□ -1.11
YRF1-3YGR296W RGS2Q99188 309 aa8.1□□□□□ -1.11
YRF1-3YGR296W SEC2P17065 759 aa8.1□□□□□ -1.11
YRF1-3YGR296W GPD2P41911 440 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W ALK1P43633 760 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W GPI1P53306 609 aa8.1□□□□□ -1.11
YRF1-3YGR296W REX2P54964 269 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W PET117Q02771 107 aa8.1□□□□□ -1.11
YRF1-3YGR296W RCR2Q03446 210 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W ENT5Q03769 411 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W SNF3P10870 884 aa8.1□□□□□ -1.11
YRF1-3YGR296W STE11P23561 717 aa8.1□□□□□ -1.11
YRF1-3YGR296W SPC34P36131 295 aa8.1□□□□□ -1.11
YRF1-3YGR296W YRO2P38079 344 aa8.1□□□□□ -1.11
YRF1-3YGR296W RCK2P38623 610 aa8.1□□□□□ -1.11
YRF1-3YGR296W IRR1P40541 1150 aa8.1□□□□□ -1.11
YRF1-3YGR296W RMD8P43620 662 aa8.1□□□□□ -1.11
YRF1-3YGR296W TIM54P47045 478 aa8.1□□□□□ -1.11
YRF1-3YGR296W GCV1P48015 400 aa8.1□□□□□ -1.11
YRF1-3YGR296W ORC5P50874 479 aa8.1□□□□□ -1.11
YRF1-3YGR296W DAK1P54838 584 aaKnown RBP8.1□□□□□ -1.11
YRF1-3YGR296W MTG1Q03151 367 aaPredicted RBP8.1□□□□□ -1.11
YRF1-3YGR296W VIK1Q12045 647 aa8.1□□□□□ -1.11
YRF1-3YGR296W TRP2P00899 507 aaKnown RBP8.09□□□□□ -1.11
YRF1-3YGR296W SPS1P08458 490 aa8.09□□□□□ -1.11
YRF1-3YGR296W GAL11P19659 1081 aa8.09□□□□□ -1.11
YRF1-3YGR296W RER1P25560 188 aa8.09□□□□□ -1.11
YRF1-3YGR296W HRR25P29295 494 aaKnown RBP8.09□□□□□ -1.11
YRF1-3YGR296W OPT1P40897 799 aa8.09□□□□□ -1.11
YRF1-3YGR296W REF2P42073 533 aaPredicted RBP8.09□□□□□ -1.11
YRF1-3YGR296W MTR3P48240 250 aaPredicted RBP8.09□□□□□ -1.11
YRF1-3YGR296W SPC19Q03954 165 aa8.09□□□□□ -1.11
YRF1-3YGR296W SPE4Q12455 300 aa8.09□□□□□ -1.11
YRF1-3YGR296W NHA1Q99271 985 aa8.09□□□□□ -1.11
YRF1-3YGR296W MRPS28P21771 286 aa8.09□□□□□ -1.11
YRF1-3YGR296W GUF1P46943 645 aa8.09□□□□□ -1.11
YRF1-3YGR296W NOP15P53927 220 aaPredicted RBP8.09□□□□□ -1.11
YRF1-3YGR296W ARX1Q03862 593 aaKnown RBP8.09□□□□□ -1.11
YRF1-3YGR296W BUD22Q04347 519 aaKnown RBP8.09□□□□□ -1.11
YRF1-3YGR296W ZPS1Q12512 249 aa8.09□□□□□ -1.11
YRF1-3YGR296W ADE4P04046 510 aaKnown RBP8.09□□□□□ -1.11
YRF1-3YGR296W CBS2P14905 389 aa8.09□□□□□ -1.11
YRF1-3YGR296W ESS1P22696 170 aa8.09□□□□□ -1.11
YRF1-3YGR296W TRK2P28584 889 aa8.09□□□□□ -1.11
YRF1-3YGR296W YHR078WP38799 552 aa8.09□□□□□ -1.11
YRF1-3YGR296W LOC1P43586 204 aaPredicted RBP8.09□□□□□ -1.11
YRF1-3YGR296W ASI1P54074 624 aa8.09□□□□□ -1.11
YRF1-3YGR296W UBP2Q01476 1272 aa8.09□□□□□ -1.11
YRF1-3YGR296W NGL3Q03210 505 aa8.09□□□□□ -1.11
YRF1-3YGR296W RSB1Q08417 382 aa8.09□□□□□ -1.11
YRF1-3YGR296W VBA3P25594 458 aa8.09□□□□□ -1.11
YRF1-3YGR296W VBA5P36172 582 aa8.09□□□□□ -1.11
YRF1-3YGR296W POB3Q04636 552 aaKnown RBP8.09□□□□□ -1.11
YRF1-3YGR296W TRP3P00937 484 aa8.08□□□□□ -1.12
YRF1-3YGR296W PUP3P25451 205 aaKnown RBP8.08□□□□□ -1.12
YRF1-3YGR296W GBP2P25555 427 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
YRF1-3YGR296W PXL1P36166 706 aa8.08□□□□□ -1.12
YRF1-3YGR296W PMC1P38929 1173 aaPredicted RBP8.08□□□□□ -1.12
YRF1-3YGR296W THI6P41835 540 aa8.08□□□□□ -1.12
YRF1-3YGR296W YPL109CQ02981 657 aa8.08□□□□□ -1.12
YRF1-3YGR296W NOB1Q08444 459 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms