RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C SMC3P47037 1230 aa5.71□□□□□ -1.5
RPT6YGL048C ABP140Q08641 628 aaKnown RBP5.71□□□□□ -1.5
RPT6YGL048C HRT3Q12347 344 aa5.71□□□□□ -1.5
RPT6YGL048C FMP27Q06179 2628 aa5.7□□□□□ -1.5
RPT6YGL048C GAL10P04397 699 aa5.7□□□□□ -1.5
RPT6YGL048C COX11P19516 300 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C PHO84P25297 587 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C RRT12P25381 491 aa5.7□□□□□ -1.5
RPT6YGL048C PUP3P25451 205 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C GAC1P28006 793 aa5.7□□□□□ -1.5
RPT6YGL048C FRE1P32791 686 aa5.7□□□□□ -1.5
RPT6YGL048C TKL2P33315 681 aa5.7□□□□□ -1.5
RPT6YGL048C PXA2P34230 853 aa5.7□□□□□ -1.5
RPT6YGL048C YBR056WP38081 501 aa5.7□□□□□ -1.5
RPT6YGL048C OTU2P38747 307 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C SFB3P38810 929 aa5.7□□□□□ -1.5
RPT6YGL048C AIM46P38885 310 aa5.7□□□□□ -1.5
RPT6YGL048C RAD55P38953 406 aa5.7□□□□□ -1.5
RPT6YGL048C KAP123P40069 1113 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C DSE1P40077 573 aa5.7□□□□□ -1.5
RPT6YGL048C YIL165CP40446 119 aa5.7□□□□□ -1.5
RPT6YGL048C QDR1P40475 563 aa5.7□□□□□ -1.5
RPT6YGL048C SET2P46995 733 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C CPR7P47103 393 aa5.7□□□□□ -1.5
RPT6YGL048C VPS25P47142 202 aa5.7□□□□□ -1.5
RPT6YGL048C LEE1Q02799 301 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C EBS1Q03466 884 aaKnown RBP5.7□□□□□ -1.5
RPT6YGL048C HER2Q03557 464 aa5.7□□□□□ -1.5
RPT6YGL048C YDR286CQ05530 114 aa5.7□□□□□ -1.5
RPT6YGL048C BSP1Q06604 576 aa5.7□□□□□ -1.5
RPT6YGL048C GPM2Q12008 311 aa5.7□□□□□ -1.5
RPT6YGL048C YPQ1Q12010 308 aa5.7□□□□□ -1.5
RPT6YGL048C HMI1Q12039 706 aa5.7□□□□□ -1.5
RPT6YGL048C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
RPT6YGL048C HIS5P07172 385 aa5.69□□□□□ -1.5
RPT6YGL048C RPB10P22139 70 aa5.69□□□□□ -1.5
RPT6YGL048C GSY2P27472 705 aa5.69□□□□□ -1.5
RPT6YGL048C MET4P32389 672 aa5.69□□□□□ -1.5
RPT6YGL048C COY1P34237 679 aa5.69□□□□□ -1.5
RPT6YGL048C TSA1P34760 196 aaKnown RBP5.69□□□□□ -1.5
RPT6YGL048C RRN3P36070 627 aa5.69□□□□□ -1.5
RPT6YGL048C YKL023WP36103 277 aaKnown RBP5.69□□□□□ -1.5
RPT6YGL048C SHE3P38272 425 aaKnown RBP5.69□□□□□ -1.5
RPT6YGL048C EFM2P38347 419 aa5.69□□□□□ -1.5
RPT6YGL048C CTM1P38818 585 aa5.69□□□□□ -1.5
RPT6YGL048C IES5P40060 125 aa5.69□□□□□ -1.5
RPT6YGL048C CEG1Q01159 459 aaPredicted RBP5.69□□□□□ -1.5
RPT6YGL048C RNH1Q04740 348 aa5.69□□□□□ -1.5
RPT6YGL048C YAP7Q08182 245 aa5.69□□□□□ -1.5
RPT6YGL048C RPS14AP06367 137 aaKnown RBP5.68□□□□□ -1.5
RPT6YGL048C RAD16P31244 790 aa5.68□□□□□ -1.5
RPT6YGL048C NAB2P32505 525 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
RPT6YGL048C STO1P34160 861 aaKnown RBP5.68□□□□□ -1.5
RPT6YGL048C YKL100CP34248 587 aa5.68□□□□□ -1.5
RPT6YGL048C YKL050CP35736 922 aa5.68□□□□□ -1.5
RPT6YGL048C IRS4P36115 615 aaKnown RBP5.68□□□□□ -1.5
RPT6YGL048C YKR051WP36142 418 aa5.68□□□□□ -1.5
RPT6YGL048C DUG2P38149 878 aa5.68□□□□□ -1.5
RPT6YGL048C RKM3P38222 552 aa5.68□□□□□ -1.5
RPT6YGL048C RGD1P38339 666 aa5.68□□□□□ -1.5
RPT6YGL048C RPS14BP39516 138 aaKnown RBP5.68□□□□□ -1.5
RPT6YGL048C FHL1P39521 936 aa5.68□□□□□ -1.5
RPT6YGL048C PSP1P50896 841 aaKnown RBP5.68□□□□□ -1.5
RPT6YGL048C BIO5P53744 561 aaKnown RBP5.68□□□□□ -1.5
RPT6YGL048C MUB1Q03162 620 aa5.68□□□□□ -1.5
RPT6YGL048C VPS16Q03308 798 aa5.68□□□□□ -1.5
RPT6YGL048C WAR1Q03631 944 aa5.68□□□□□ -1.5
RPT6YGL048C RAD33Q04231 177 aa5.68□□□□□ -1.5
RPT6YGL048C PRM6Q04705 352 aa5.68□□□□□ -1.5
RPT6YGL048C YLR297WQ05899 129 aa5.68□□□□□ -1.5
RPT6YGL048C SLP1Q12232 587 aa5.68□□□□□ -1.5
RPT6YGL048C APC2Q12440 853 aa5.68□□□□□ -1.5
RPT6YGL048C TMA17Q12513 150 aa5.68□□□□□ -1.5
RPT6YGL048C ECM3Q99252 613 aa5.68□□□□□ -1.5
RPT6YGL048C TOR1P35169 2470 aa5.67□□□□□ -1.5
RPT6YGL048C STF1P01098 86 aa5.67□□□□□ -1.5
RPT6YGL048C GLK1P17709 500 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C CLN2P20438 545 aa5.67□□□□□ -1.5
RPT6YGL048C STE11P23561 717 aa5.67□□□□□ -1.5
RPT6YGL048C PPH22P23595 377 aa5.67□□□□□ -1.5
RPT6YGL048C SAT4P25333 603 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C VBA3P25594 458 aa5.67□□□□□ -1.5
RPT6YGL048C APL1P27351 700 aa5.67□□□□□ -1.5
RPT6YGL048C THI4P32318 326 aa5.67□□□□□ -1.5
RPT6YGL048C VMA8P32610 256 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C MDJ1P35191 511 aa5.67□□□□□ -1.5
RPT6YGL048C YET1P35723 206 aa5.67□□□□□ -1.5
RPT6YGL048C VBA5P36172 582 aa5.67□□□□□ -1.5
RPT6YGL048C ADE17P38009 592 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C POL12P38121 705 aaPredicted RBP5.67□□□□□ -1.5
RPT6YGL048C ALG14P38242 237 aa5.67□□□□□ -1.5
RPT6YGL048C VPS41P38959 992 aa5.67□□□□□ -1.5
RPT6YGL048C YMR124WP39523 943 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C GEM1P39722 662 aa5.67□□□□□ -1.5
RPT6YGL048C YFL066CP43538 392 aa5.67□□□□□ -1.5
RPT6YGL048C RGD2P43556 714 aa5.67□□□□□ -1.5
RPT6YGL048C YJR054WP47114 497 aa5.67□□□□□ -1.5
RPT6YGL048C PPT1P53043 513 aa5.67□□□□□ -1.5
RPT6YGL048C TAN1P53072 289 aaPredicted RBP5.67□□□□□ -1.5
RPT6YGL048C CWC24P53769 259 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms