RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W YDR306CQ06640 478 aa4.34□□□□□ -1.71
UBP6YFR010W HAL9Q12180 1030 aa4.34□□□□□ -1.71
UBP6YFR010W ENA5Q12691 1091 aa4.34□□□□□ -1.71
UBP6YFR010W YLR358CO13565 187 aa4.33□□□□□ -1.72
UBP6YFR010W ADE8P04161 214 aa4.33□□□□□ -1.72
UBP6YFR010W FUM1P08417 488 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W GRR1P24814 1151 aa4.33□□□□□ -1.72
UBP6YFR010W DMC1P25453 334 aa4.33□□□□□ -1.72
UBP6YFR010W ADK2P26364 225 aa4.33□□□□□ -1.72
UBP6YFR010W ACP1P32463 125 aa4.33□□□□□ -1.72
UBP6YFR010W RMA1P36001 430 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W TAF5P38129 798 aa4.33□□□□□ -1.72
UBP6YFR010W RGD1P38339 666 aa4.33□□□□□ -1.72
UBP6YFR010W PPE1P38796 400 aa4.33□□□□□ -1.72
UBP6YFR010W YMR124WP39523 943 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W RPN3P40016 523 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W TRF5P48561 642 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W SGF73P53165 657 aa4.33□□□□□ -1.72
UBP6YFR010W LSC1P53598 329 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W YNR061CP53747 219 aa4.33□□□□□ -1.72
UBP6YFR010W JJJ1P53863 590 aa4.33□□□□□ -1.72
UBP6YFR010W HOS3Q02959 697 aaKnown RBP4.33□□□□□ -1.72
UBP6YFR010W AIM32Q04689 311 aa4.33□□□□□ -1.72
UBP6YFR010W YDR338CQ05497 695 aa4.33□□□□□ -1.72
UBP6YFR010W YPL066WQ12194 479 aa4.33□□□□□ -1.72
UBP6YFR010W RPS21AP0C0V8 87 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W HMG1P12683 1054 aa4.32□□□□□ -1.72
UBP6YFR010W NCP1P16603 691 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W UBC1P21734 215 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W RRP43P25359 394 aaPredicted RBP4.32□□□□□ -1.72
UBP6YFR010W YJU2P28320 278 aaPredicted RBP4.32□□□□□ -1.72
UBP6YFR010W HSP104P31539 908 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W YUH1P35127 236 aa4.32□□□□□ -1.72
UBP6YFR010W APM3P38153 483 aa4.32□□□□□ -1.72
UBP6YFR010W PIH1P38768 344 aa4.32□□□□□ -1.72
UBP6YFR010W ATF1P40353 525 aa4.32□□□□□ -1.72
UBP6YFR010W YFL054CP43549 646 aa4.32□□□□□ -1.72
UBP6YFR010W MET12P46151 657 aa4.32□□□□□ -1.72
UBP6YFR010W TCB2P48231 1178 aa4.32□□□□□ -1.72
UBP6YFR010W LYS4P49367 693 aaPredicted RBP4.32□□□□□ -1.72
UBP6YFR010W TEL2P53038 688 aa4.32□□□□□ -1.72
UBP6YFR010W NCS6P53088 359 aa4.32□□□□□ -1.72
UBP6YFR010W RRT6P53117 311 aaPredicted RBP4.32□□□□□ -1.72
UBP6YFR010W CPR6P53691 371 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W MRPL22P53881 309 aa4.32□□□□□ -1.72
UBP6YFR010W INP2Q03824 705 aa4.32□□□□□ -1.72
UBP6YFR010W YAP6Q03935 383 aa4.32□□□□□ -1.72
UBP6YFR010W VBA4Q04602 768 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W TRM8Q12009 286 aa4.32□□□□□ -1.72
UBP6YFR010W RTC5Q12108 567 aaKnown RBP4.32□□□□□ -1.72
UBP6YFR010W PSY3Q12318 242 aa4.32□□□□□ -1.72
UBP6YFR010W YIL002W-AQ3E7Z5 69 aa4.32□□□□□ -1.72
UBP6YFR010W YOR019WQ99248 730 aa4.32□□□□□ -1.72
UBP6YFR010W GCN4P03069 281 aa4.31□□□□□ -1.72
UBP6YFR010W APE1P14904 514 aa4.31□□□□□ -1.72
UBP6YFR010W CLC1P17891 233 aa4.31□□□□□ -1.72
UBP6YFR010W CLN1P20437 546 aa4.31□□□□□ -1.72
UBP6YFR010W HCA4P20448 770 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W DBP2P24783 546 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W YEL043WP32618 956 aa4.31□□□□□ -1.72
UBP6YFR010W PIK1P39104 1066 aa4.31□□□□□ -1.72
UBP6YFR010W LYS14P40971 790 aa4.31□□□□□ -1.72
UBP6YFR010W FET5P43561 622 aa4.31□□□□□ -1.72
UBP6YFR010W GYP8P43570 497 aa4.31□□□□□ -1.72
UBP6YFR010W GUS1P46655 708 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
UBP6YFR010W SAP4P53036 818 aa4.31□□□□□ -1.72
UBP6YFR010W TAD1P53065 400 aa4.31□□□□□ -1.72
UBP6YFR010W YBP2P53169 641 aa4.31□□□□□ -1.72
UBP6YFR010W ART5P53244 586 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W YNL050CP53952 270 aa4.31□□□□□ -1.72
UBP6YFR010W GYL1Q04322 720 aa4.31□□□□□ -1.72
UBP6YFR010W DON1Q05610 365 aa4.31□□□□□ -1.72
UBP6YFR010W KAP95Q06142 861 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W SPH1Q06160 661 aa4.31□□□□□ -1.72
UBP6YFR010W RRT8Q08219 342 aa4.31□□□□□ -1.72
UBP6YFR010W TGL5Q12043 749 aa4.31□□□□□ -1.72
UBP6YFR010W YPR071WQ12346 211 aa4.31□□□□□ -1.72
UBP6YFR010W PCD1Q12524 340 aa4.31□□□□□ -1.72
UBP6YFR010W NUC1P08466 329 aa4.31□□□□□ -1.72
UBP6YFR010W VPS3P23643 1011 aa4.31□□□□□ -1.72
UBP6YFR010W SPS22P25380 463 aa4.31□□□□□ -1.72
UBP6YFR010W HMX1P32339 317 aa4.31□□□□□ -1.72
UBP6YFR010W HOG1P32485 435 aa4.31□□□□□ -1.72
UBP6YFR010W SAC6P32599 642 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W AFR1P33304 620 aa4.31□□□□□ -1.72
UBP6YFR010W BUD2P33314 1104 aa4.31□□□□□ -1.72
UBP6YFR010W ECM4P36156 370 aa4.31□□□□□ -1.72
UBP6YFR010W HXT6P39003 570 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W HXT7P39004 570 aa4.31□□□□□ -1.72
UBP6YFR010W MPH1P40562 993 aa4.31□□□□□ -1.72
UBP6YFR010W THI6P41835 540 aa4.31□□□□□ -1.72
UBP6YFR010W BNA2P47125 453 aa4.31□□□□□ -1.72
UBP6YFR010W BPL1P48445 690 aaPredicted RBP4.31□□□□□ -1.72
UBP6YFR010W CTF18P49956 741 aa4.31□□□□□ -1.72
UBP6YFR010W HFM1P51979 1187 aa4.31□□□□□ -1.72
UBP6YFR010W OGG1P53397 376 aaPredicted RBP4.31□□□□□ -1.72
UBP6YFR010W LCD1Q04377 747 aa4.31□□□□□ -1.72
UBP6YFR010W ERB1Q04660 807 aaKnown RBP4.31□□□□□ -1.72
UBP6YFR010W GTB1Q04924 702 aa4.31□□□□□ -1.72
UBP6YFR010W RSC3Q06639 885 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms