RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C NDJ1Q12366 352 aa8.05□□□□□ -1.12
PUP3YER094C AVL9Q12500 764 aa8.05□□□□□ -1.12
PUP3YER094C IMA3P0CW40 589 aa8.04□□□□□ -1.12
PUP3YER094C IMA4P0CW41 589 aa8.04□□□□□ -1.12
PUP3YER094C HEM15P16622 393 aa8.04□□□□□ -1.12
PUP3YER094C MRPL25P23369 157 aa8.04□□□□□ -1.12
PUP3YER094C KAR4P25583 335 aa8.04□□□□□ -1.12
PUP3YER094C ILV6P25605 309 aaKnown RBP8.04□□□□□ -1.12
PUP3YER094C ADY2P25613 283 aa8.04□□□□□ -1.12
PUP3YER094C PSE1P32337 1089 aaKnown RBP8.04□□□□□ -1.12
PUP3YER094C AIM26P32858 118 aa8.04□□□□□ -1.12
PUP3YER094C KES1P35844 434 aaKnown RBP8.04□□□□□ -1.12
PUP3YER094C MSR1P38714 643 aa8.04□□□□□ -1.12
PUP3YER094C CIN4P39110 191 aa8.04□□□□□ -1.12
PUP3YER094C NUP60P39705 539 aa8.04□□□□□ -1.12
PUP3YER094C YEL028WP39989 153 aa8.04□□□□□ -1.12
PUP3YER094C ALA1P40825 983 aaKnown RBP8.04□□□□□ -1.12
PUP3YER094C EMW1P42842 904 aaKnown RBP8.04□□□□□ -1.12
PUP3YER094C YMR160WQ03823 816 aa8.04□□□□□ -1.12
PUP3YER094C PIG1Q06216 648 aa8.04□□□□□ -1.12
PUP3YER094C IMA2Q08295 589 aa8.04□□□□□ -1.12
PUP3YER094C NRT1Q08485 598 aa8.04□□□□□ -1.12
PUP3YER094C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
PUP3YER094C YOR223WQ12015 292 aa8.04□□□□□ -1.12
PUP3YER094C SPE3Q12074 293 aaKnown RBP8.04□□□□□ -1.12
PUP3YER094C AI5_ALPHAQ9ZZX1 630 aa8.04□□□□□ -1.12
PUP3YER094C ENO2P00925 437 aaKnown RBP8.03□□□□□ -1.12
PUP3YER094C URA7P28274 579 aaKnown RBP8.03□□□□□ -1.12
PUP3YER094C YBP1P38315 674 aa8.03□□□□□ -1.12
PUP3YER094C STB5P38699 743 aa8.03□□□□□ -1.12
PUP3YER094C PPE1P38796 400 aa8.03□□□□□ -1.12
PUP3YER094C SFB3P38810 929 aa8.03□□□□□ -1.12
PUP3YER094C EDC3P39998 551 aaKnown RBP8.03□□□□□ -1.12
PUP3YER094C ATM1P40416 690 aa8.03□□□□□ -1.12
PUP3YER094C UFE1P41834 346 aa8.03□□□□□ -1.12
PUP3YER094C RTT101P47050 842 aa8.03□□□□□ -1.12
PUP3YER094C TAN1P53072 289 aaPredicted RBP8.03□□□□□ -1.12
PUP3YER094C YNL034WP53963 612 aa8.03□□□□□ -1.12
PUP3YER094C KTR5P53966 522 aaPredicted RBP8.03□□□□□ -1.12
PUP3YER094C YNL018CP53976 612 aa8.03□□□□□ -1.12
PUP3YER094C PIR3Q03180 325 aa8.03□□□□□ -1.12
PUP3YER094C USA1Q03714 838 aa8.03□□□□□ -1.12
PUP3YER094C GRX8Q05926 109 aa8.03□□□□□ -1.12
PUP3YER094C LCB4Q12246 624 aa8.03□□□□□ -1.12
PUP3YER094C PYC1P11154 1178 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C MTF1P14908 341 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C SYN8P31377 255 aa8.02□□□□□ -1.13
PUP3YER094C SEC6P32844 805 aa8.02□□□□□ -1.13
PUP3YER094C MRS6P32864 603 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C OAF3P36023 863 aa8.02□□□□□ -1.13
PUP3YER094C CTK3P46963 296 aaPredicted RBP8.02□□□□□ -1.13
PUP3YER094C IML2P47031 731 aa8.02□□□□□ -1.13
PUP3YER094C PSP1P50896 841 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C YPR003CP53394 754 aa8.02□□□□□ -1.13
PUP3YER094C NRD1P53617 575 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
PUP3YER094C SLU7Q02775 382 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C UTP13Q05946 817 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C MPC54Q08550 464 aa8.02□□□□□ -1.13
PUP3YER094C YPQ1Q12010 308 aa8.02□□□□□ -1.13
PUP3YER094C HOS1Q12214 470 aa8.02□□□□□ -1.13
PUP3YER094C LPX1Q12405 387 aaKnown RBP8.02□□□□□ -1.13
PUP3YER094C HMG2P12684 1045 aa8.01□□□□□ -1.13
PUP3YER094C KTR4P38131 464 aa8.01□□□□□ -1.13
PUP3YER094C FUI1P38196 639 aa8.01□□□□□ -1.13
PUP3YER094C KAP104P38217 918 aaKnown RBP8.01□□□□□ -1.13
PUP3YER094C SRP68P38687 599 aaKnown RBP8.01□□□□□ -1.13
PUP3YER094C SMF2P38778 549 aa8.01□□□□□ -1.13
PUP3YER094C VAC8P39968 578 aa8.01□□□□□ -1.13
PUP3YER094C YAT2P40017 923 aa8.01□□□□□ -1.13
PUP3YER094C BST1P43571 1029 aa8.01□□□□□ -1.13
PUP3YER094C ROK1P45818 564 aaPredicted RBP8.01□□□□□ -1.13
PUP3YER094C SAE2P46946 345 aa8.01□□□□□ -1.13
PUP3YER094C SNG1P46950 547 aa8.01□□□□□ -1.13
PUP3YER094C TAH11P47112 604 aa8.01□□□□□ -1.13
PUP3YER094C PRP24P49960 444 aaKnown RBP8.01□□□□□ -1.13
PUP3YER094C ADI1Q03677 179 aa8.01□□□□□ -1.13
PUP3YER094C TEF1P02994 458 aaKnown RBP8□□□□□ -1.13
PUP3YER094C ILS1P09436 1072 aaKnown RBP8□□□□□ -1.13
PUP3YER094C ERR1P0CX10 437 aa8□□□□□ -1.13
PUP3YER094C ERR2P0CX11 437 aa8□□□□□ -1.13
PUP3YER094C PEX34P25584 144 aa8□□□□□ -1.13
PUP3YER094C PAT1P25644 796 aaKnown RBP8□□□□□ -1.13
PUP3YER094C CDC20P26309 610 aa8□□□□□ -1.13
PUP3YER094C URA10P30402 227 aa8□□□□□ -1.13
PUP3YER094C NDI1P32340 513 aa8□□□□□ -1.13
PUP3YER094C UTR2P32623 467 aa8□□□□□ -1.13
PUP3YER094C SGE1P33335 543 aa8□□□□□ -1.13
PUP3YER094C PTC3P34221 468 aaKnown RBP8□□□□□ -1.13
PUP3YER094C PEX5P35056 612 aa8□□□□□ -1.13
PUP3YER094C PEX28P38848 579 aa8□□□□□ -1.13
PUP3YER094C PXA1P41909 870 aa8□□□□□ -1.13
PUP3YER094C ERR3P42222 437 aa8□□□□□ -1.13
PUP3YER094C COQ6P53318 479 aa8□□□□□ -1.13
PUP3YER094C TRM112P53738 135 aaPredicted RBP8□□□□□ -1.13
PUP3YER094C NSE5Q03718 556 aa8□□□□□ -1.13
PUP3YER094C ENT5Q03769 411 aaKnown RBP8□□□□□ -1.13
PUP3YER094C INP2Q03824 705 aa8□□□□□ -1.13
PUP3YER094C ADE13Q05911 482 aaKnown RBP8□□□□□ -1.13
PUP3YER094C BSP1Q06604 576 aa8□□□□□ -1.13
PUP3YER094C SWC7Q06707 132 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms